Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1982

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1981 and B158DRAFT_1982 are separated by 72 nucleotidesB158DRAFT_1982 and B158DRAFT_1983 are separated by 45 nucleotidesB158DRAFT_1983 and B158DRAFT_1984 are separated by 162 nucleotides B158DRAFT_1981: B158DRAFT_1981 - coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22), at 117,290 to 118,666 _1981 B158DRAFT_1982: B158DRAFT_1982 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 118,739 to 119,452 _1982 B158DRAFT_1983: B158DRAFT_1983 - Protein of unknown function (DUF1282)., at 119,498 to 120,094 _1983 B158DRAFT_1984: B158DRAFT_1984 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 120,257 to 121,018 _1984 Position (kb) 118 119 120Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 117.755 kb on + strand, within B158DRAFT_1981at 117.816 kb on + strand, within B158DRAFT_1981at 117.922 kb on + strand, within B158DRAFT_1981at 118.007 kb on + strand, within B158DRAFT_1981at 118.007 kb on + strand, within B158DRAFT_1981at 118.015 kb on - strand, within B158DRAFT_1981at 118.051 kb on - strand, within B158DRAFT_1981at 118.067 kb on - strand, within B158DRAFT_1981at 118.191 kb on - strand, within B158DRAFT_1981at 118.225 kb on + strand, within B158DRAFT_1981at 118.225 kb on + strand, within B158DRAFT_1981at 118.225 kb on + strand, within B158DRAFT_1981at 118.233 kb on - strand, within B158DRAFT_1981at 118.233 kb on - strand, within B158DRAFT_1981at 118.233 kb on - strand, within B158DRAFT_1981at 118.244 kb on + strand, within B158DRAFT_1981at 118.317 kb on + strand, within B158DRAFT_1981at 118.325 kb on - strand, within B158DRAFT_1981at 118.325 kb on - strand, within B158DRAFT_1981at 118.325 kb on - strand, within B158DRAFT_1981at 118.325 kb on - strand, within B158DRAFT_1981at 118.325 kb on - strand, within B158DRAFT_1981at 118.352 kb on - strand, within B158DRAFT_1981at 118.532 kb on + strandat 118.585 kb on - strandat 118.709 kb on - strandat 118.709 kb on - strandat 118.718 kb on + strandat 118.736 kb on - strandat 118.808 kb on - strandat 118.818 kb on - strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.833 kb on + strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.841 kb on - strand, within B158DRAFT_1982at 118.926 kb on + strand, within B158DRAFT_1982at 118.934 kb on - strand, within B158DRAFT_1982at 118.934 kb on - strand, within B158DRAFT_1982at 118.934 kb on - strand, within B158DRAFT_1982at 118.961 kb on + strand, within B158DRAFT_1982at 118.969 kb on - strand, within B158DRAFT_1982at 118.969 kb on - strand, within B158DRAFT_1982at 119.006 kb on + strand, within B158DRAFT_1982at 119.009 kb on - strand, within B158DRAFT_1982at 119.027 kb on + strand, within B158DRAFT_1982at 119.063 kb on - strand, within B158DRAFT_1982at 119.070 kb on - strand, within B158DRAFT_1982at 119.070 kb on - strand, within B158DRAFT_1982at 119.070 kb on - strand, within B158DRAFT_1982at 119.115 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.339 kb on - strand, within B158DRAFT_1982at 119.442 kb on - strandat 119.480 kb on + strandat 119.480 kb on + strandat 119.480 kb on + strandat 119.488 kb on + strandat 119.488 kb on - strandat 119.488 kb on - strandat 119.488 kb on - strandat 119.488 kb on - strandat 119.491 kb on - strandat 119.491 kb on - strandat 119.546 kb on - strandat 119.606 kb on + strand, within B158DRAFT_1983at 119.614 kb on - strand, within B158DRAFT_1983at 119.642 kb on + strand, within B158DRAFT_1983at 119.642 kb on + strand, within B158DRAFT_1983at 119.642 kb on + strand, within B158DRAFT_1983at 119.642 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.691 kb on + strand, within B158DRAFT_1983at 119.785 kb on - strand, within B158DRAFT_1983at 119.887 kb on + strand, within B158DRAFT_1983at 119.892 kb on + strand, within B158DRAFT_1983at 119.895 kb on - strand, within B158DRAFT_1983at 119.895 kb on - strand, within B158DRAFT_1983at 119.897 kb on + strand, within B158DRAFT_1983at 119.897 kb on + strand, within B158DRAFT_1983at 119.905 kb on - strand, within B158DRAFT_1983at 119.915 kb on - strand, within B158DRAFT_1983at 119.918 kb on + strand, within B158DRAFT_1983at 119.997 kb on + strand, within B158DRAFT_1983at 120.009 kb on + strand, within B158DRAFT_1983at 120.015 kb on + strand, within B158DRAFT_1983at 120.033 kb on - strand, within B158DRAFT_1983at 120.048 kb on + strandat 120.080 kb on + strandat 120.080 kb on + strandat 120.088 kb on - strandat 120.088 kb on - strandat 120.088 kb on - strandat 120.149 kb on - strandat 120.153 kb on + strandat 120.153 kb on + strandat 120.161 kb on - strandat 120.161 kb on - strandat 120.161 kb on - strandat 120.161 kb on - strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.325 kb on - strandat 120.327 kb on + strandat 120.335 kb on - strand, within B158DRAFT_1984at 120.335 kb on - strand, within B158DRAFT_1984at 120.387 kb on - strand, within B158DRAFT_1984at 120.451 kb on - strand, within B158DRAFT_1984

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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117,755 + B158DRAFT_1981 0.34 -0.3
117,816 + B158DRAFT_1981 0.38 -0.1
117,922 + B158DRAFT_1981 0.46 -2.3
118,007 + B158DRAFT_1981 0.52 +0.7
118,007 + B158DRAFT_1981 0.52 +1.3
118,015 - B158DRAFT_1981 0.53 -0.5
118,051 - B158DRAFT_1981 0.55 -0.8
118,067 - B158DRAFT_1981 0.56 +1.7
118,191 - B158DRAFT_1981 0.65 -0.3
118,225 + B158DRAFT_1981 0.68 -1.1
118,225 + B158DRAFT_1981 0.68 -0.6
118,225 + B158DRAFT_1981 0.68 -1.0
118,233 - B158DRAFT_1981 0.68 -0.2
118,233 - B158DRAFT_1981 0.68 -1.5
118,233 - B158DRAFT_1981 0.68 -1.6
118,244 + B158DRAFT_1981 0.69 -0.1
118,317 + B158DRAFT_1981 0.75 -1.4
118,325 - B158DRAFT_1981 0.75 -1.1
118,325 - B158DRAFT_1981 0.75 -0.9
118,325 - B158DRAFT_1981 0.75 -1.0
118,325 - B158DRAFT_1981 0.75 -0.6
118,325 - B158DRAFT_1981 0.75 -0.2
118,352 - B158DRAFT_1981 0.77 -0.4
118,532 + -1.1
118,585 - -0.7
118,709 - -1.8
118,709 - -0.7
118,718 + -0.3
118,736 - -0.7
118,808 - +2.1
118,818 - B158DRAFT_1982 0.11 -0.2
118,833 + B158DRAFT_1982 0.13 -0.3
118,833 + B158DRAFT_1982 0.13 -0.2
118,833 + B158DRAFT_1982 0.13 -0.6
118,833 + B158DRAFT_1982 0.13 -0.6
118,833 + B158DRAFT_1982 0.13 +0.3
118,833 + B158DRAFT_1982 0.13 +0.6
118,833 + B158DRAFT_1982 0.13 -2.2
118,833 + B158DRAFT_1982 0.13 -1.7
118,833 + B158DRAFT_1982 0.13 +1.1
118,833 + B158DRAFT_1982 0.13 +0.7
118,833 + B158DRAFT_1982 0.13 -0.4
118,833 + B158DRAFT_1982 0.13 -1.0
118,841 - B158DRAFT_1982 0.14 -1.9
118,841 - B158DRAFT_1982 0.14 -0.7
118,841 - B158DRAFT_1982 0.14 +1.2
118,841 - B158DRAFT_1982 0.14 -0.9
118,841 - B158DRAFT_1982 0.14 -0.4
118,841 - B158DRAFT_1982 0.14 -0.1
118,841 - B158DRAFT_1982 0.14 -0.8
118,841 - B158DRAFT_1982 0.14 -1.6
118,841 - B158DRAFT_1982 0.14 +0.6
118,841 - B158DRAFT_1982 0.14 +0.4
118,841 - B158DRAFT_1982 0.14 +0.4
118,841 - B158DRAFT_1982 0.14 +1.1
118,841 - B158DRAFT_1982 0.14 -1.3
118,841 - B158DRAFT_1982 0.14 -1.2
118,926 + B158DRAFT_1982 0.26 -0.4
118,934 - B158DRAFT_1982 0.27 -1.4
118,934 - B158DRAFT_1982 0.27 +0.7
118,934 - B158DRAFT_1982 0.27 -1.8
118,961 + B158DRAFT_1982 0.31 -1.2
118,969 - B158DRAFT_1982 0.32 -1.0
118,969 - B158DRAFT_1982 0.32 -0.7
119,006 + B158DRAFT_1982 0.37 -0.9
119,009 - B158DRAFT_1982 0.38 -0.5
119,027 + B158DRAFT_1982 0.40 -2.2
119,063 - B158DRAFT_1982 0.45 -0.7
119,070 - B158DRAFT_1982 0.46 -0.6
119,070 - B158DRAFT_1982 0.46 -0.8
119,070 - B158DRAFT_1982 0.46 +0.8
119,115 + B158DRAFT_1982 0.53 -1.4
119,271 + B158DRAFT_1982 0.75 -1.3
119,271 + B158DRAFT_1982 0.75 -0.1
119,271 + B158DRAFT_1982 0.75 +0.1
119,271 + B158DRAFT_1982 0.75 +0.7
119,271 + B158DRAFT_1982 0.75 -1.5
119,271 + B158DRAFT_1982 0.75 -0.9
119,271 + B158DRAFT_1982 0.75 +0.7
119,271 + B158DRAFT_1982 0.75 -1.3
119,271 + B158DRAFT_1982 0.75 -1.5
119,279 - B158DRAFT_1982 0.76 -0.2
119,279 - B158DRAFT_1982 0.76 -0.9
119,279 - B158DRAFT_1982 0.76 -1.8
119,279 - B158DRAFT_1982 0.76 +0.2
119,279 - B158DRAFT_1982 0.76 +0.0
119,339 - B158DRAFT_1982 0.84 +0.6
119,442 - -0.7
119,480 + -1.3
119,480 + -3.0
119,480 + +0.4
119,488 + -0.8
119,488 - -0.8
119,488 - -0.4
119,488 - -0.9
119,488 - -0.2
119,491 - -1.7
119,491 - -2.2
119,546 - -0.2
119,606 + B158DRAFT_1983 0.18 -0.6
119,614 - B158DRAFT_1983 0.19 +0.4
119,642 + B158DRAFT_1983 0.24 -1.0
119,642 + B158DRAFT_1983 0.24 -1.6
119,642 + B158DRAFT_1983 0.24 -0.7
119,642 + B158DRAFT_1983 0.24 -0.9
119,644 + B158DRAFT_1983 0.24 +2.0
119,644 + B158DRAFT_1983 0.24 -0.4
119,644 + B158DRAFT_1983 0.24 +0.0
119,644 + B158DRAFT_1983 0.24 -2.3
119,644 + B158DRAFT_1983 0.24 -0.6
119,644 + B158DRAFT_1983 0.24 -0.9
119,644 + B158DRAFT_1983 0.24 +0.6
119,644 + B158DRAFT_1983 0.24 +0.9
119,650 - B158DRAFT_1983 0.25 -1.4
119,650 - B158DRAFT_1983 0.25 -0.2
119,650 - B158DRAFT_1983 0.25 -2.6
119,650 - B158DRAFT_1983 0.25 -0.9
119,650 - B158DRAFT_1983 0.25 -1.1
119,650 - B158DRAFT_1983 0.25 -0.4
119,650 - B158DRAFT_1983 0.25 +0.3
119,650 - B158DRAFT_1983 0.25 -0.1
119,650 - B158DRAFT_1983 0.25 -0.2
119,652 - B158DRAFT_1983 0.26 -0.0
119,652 - B158DRAFT_1983 0.26 -1.0
119,652 - B158DRAFT_1983 0.26 -0.2
119,652 - B158DRAFT_1983 0.26 -2.5
119,652 - B158DRAFT_1983 0.26 +0.4
119,652 - B158DRAFT_1983 0.26 -1.5
119,652 - B158DRAFT_1983 0.26 -0.3
119,652 - B158DRAFT_1983 0.26 -0.6
119,652 - B158DRAFT_1983 0.26 -0.2
119,652 - B158DRAFT_1983 0.26 -0.9
119,691 + B158DRAFT_1983 0.32 +0.1
119,785 - B158DRAFT_1983 0.48 +0.4
119,887 + B158DRAFT_1983 0.65 -0.4
119,892 + B158DRAFT_1983 0.66 +1.3
119,895 - B158DRAFT_1983 0.66 -1.3
119,895 - B158DRAFT_1983 0.66 -0.4
119,897 + B158DRAFT_1983 0.67 -0.3
119,897 + B158DRAFT_1983 0.67 -2.3
119,905 - B158DRAFT_1983 0.68 -1.3
119,915 - B158DRAFT_1983 0.70 -1.0
119,918 + B158DRAFT_1983 0.70 -2.0
119,997 + B158DRAFT_1983 0.84 -0.3
120,009 + B158DRAFT_1983 0.86 +0.7
120,015 + B158DRAFT_1983 0.87 +0.6
120,033 - B158DRAFT_1983 0.90 -0.0
120,048 + -0.2
120,080 + -0.5
120,080 + +0.0
120,088 - -2.0
120,088 - -0.2
120,088 - -0.8
120,149 - -0.2
120,153 + +2.4
120,153 + +1.9
120,161 - +2.0
120,161 - -0.6
120,161 - -0.8
120,161 - -2.0
120,189 + -0.7
120,189 + -1.6
120,189 + -0.6
120,189 + -1.7
120,189 + -0.6
120,189 + -0.1
120,189 + +0.1
120,189 + -1.7
120,189 + +0.2
120,189 + +0.2
120,189 + -1.9
120,189 + -2.4
120,189 + -0.9
120,189 + -1.9
120,189 + -1.0
120,189 + +0.5
120,189 + -0.7
120,189 + -2.2
120,189 + -0.1
120,189 + +0.5
120,189 + +0.2
120,189 + -0.3
120,189 + -1.8
120,189 + -2.2
120,189 + -0.2
120,189 + -0.8
120,189 + -0.6
120,189 + -1.6
120,189 + -1.7
120,189 + -1.8
120,197 - -0.0
120,197 - -0.8
120,197 - -1.0
120,197 - -0.6
120,197 - -0.6
120,197 - -1.2
120,197 - -0.6
120,197 - -1.6
120,197 - -0.8
120,197 - -0.5
120,197 - +1.9
120,197 - -0.4
120,197 - +1.0
120,197 - -1.3
120,197 - +0.5
120,197 - -0.3
120,197 - -0.9
120,197 - -1.5
120,197 - -0.6
120,197 - -1.8
120,197 - -0.6
120,197 - +1.1
120,197 - -0.0
120,197 - +0.5
120,197 - -1.9
120,197 - -2.4
120,197 - -1.7
120,197 - +1.4
120,197 - -0.8
120,197 - +0.7
120,197 - -0.9
120,197 - -1.6
120,325 - +0.6
120,327 + -2.0
120,335 - B158DRAFT_1984 0.10 -2.2
120,335 - B158DRAFT_1984 0.10 +0.2
120,387 - B158DRAFT_1984 0.17 -1.9
120,451 - B158DRAFT_1984 0.25 +0.8

Or see this region's nucleotide sequence