Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1981 and B158DRAFT_1982 are separated by 72 nucleotides B158DRAFT_1982 and B158DRAFT_1983 are separated by 45 nucleotides B158DRAFT_1983 and B158DRAFT_1984 are separated by 162 nucleotides
B158DRAFT_1981: B158DRAFT_1981 - coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22), at 117,290 to 118,666
_1981
B158DRAFT_1982: B158DRAFT_1982 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 118,739 to 119,452
_1982
B158DRAFT_1983: B158DRAFT_1983 - Protein of unknown function (DUF1282)., at 119,498 to 120,094
_1983
B158DRAFT_1984: B158DRAFT_1984 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 120,257 to 121,018
_1984
Position (kb)
118
119
120 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 117.755 kb on + strand, within B158DRAFT_1981 at 117.816 kb on + strand, within B158DRAFT_1981 at 117.922 kb on + strand, within B158DRAFT_1981 at 118.007 kb on + strand, within B158DRAFT_1981 at 118.007 kb on + strand, within B158DRAFT_1981 at 118.015 kb on - strand, within B158DRAFT_1981 at 118.051 kb on - strand, within B158DRAFT_1981 at 118.067 kb on - strand, within B158DRAFT_1981 at 118.191 kb on - strand, within B158DRAFT_1981 at 118.225 kb on + strand, within B158DRAFT_1981 at 118.225 kb on + strand, within B158DRAFT_1981 at 118.225 kb on + strand, within B158DRAFT_1981 at 118.233 kb on - strand, within B158DRAFT_1981 at 118.233 kb on - strand, within B158DRAFT_1981 at 118.233 kb on - strand, within B158DRAFT_1981 at 118.244 kb on + strand, within B158DRAFT_1981 at 118.317 kb on + strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.325 kb on - strand, within B158DRAFT_1981 at 118.352 kb on - strand, within B158DRAFT_1981 at 118.532 kb on + strand at 118.585 kb on - strand at 118.709 kb on - strand at 118.709 kb on - strand at 118.718 kb on + strand at 118.736 kb on - strand at 118.808 kb on - strand at 118.818 kb on - strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.833 kb on + strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.841 kb on - strand, within B158DRAFT_1982 at 118.926 kb on + strand, within B158DRAFT_1982 at 118.934 kb on - strand, within B158DRAFT_1982 at 118.934 kb on - strand, within B158DRAFT_1982 at 118.934 kb on - strand, within B158DRAFT_1982 at 118.961 kb on + strand, within B158DRAFT_1982 at 118.969 kb on - strand, within B158DRAFT_1982 at 118.969 kb on - strand, within B158DRAFT_1982 at 119.006 kb on + strand, within B158DRAFT_1982 at 119.009 kb on - strand, within B158DRAFT_1982 at 119.027 kb on + strand, within B158DRAFT_1982 at 119.063 kb on - strand, within B158DRAFT_1982 at 119.070 kb on - strand, within B158DRAFT_1982 at 119.070 kb on - strand, within B158DRAFT_1982 at 119.070 kb on - strand, within B158DRAFT_1982 at 119.115 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.339 kb on - strand, within B158DRAFT_1982 at 119.442 kb on - strand at 119.480 kb on + strand at 119.480 kb on + strand at 119.480 kb on + strand at 119.488 kb on + strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.491 kb on - strand at 119.491 kb on - strand at 119.546 kb on - strand at 119.606 kb on + strand, within B158DRAFT_1983 at 119.614 kb on - strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.691 kb on + strand, within B158DRAFT_1983 at 119.785 kb on - strand, within B158DRAFT_1983 at 119.887 kb on + strand, within B158DRAFT_1983 at 119.892 kb on + strand, within B158DRAFT_1983 at 119.895 kb on - strand, within B158DRAFT_1983 at 119.895 kb on - strand, within B158DRAFT_1983 at 119.897 kb on + strand, within B158DRAFT_1983 at 119.897 kb on + strand, within B158DRAFT_1983 at 119.905 kb on - strand, within B158DRAFT_1983 at 119.915 kb on - strand, within B158DRAFT_1983 at 119.918 kb on + strand, within B158DRAFT_1983 at 119.997 kb on + strand, within B158DRAFT_1983 at 120.009 kb on + strand, within B158DRAFT_1983 at 120.015 kb on + strand, within B158DRAFT_1983 at 120.033 kb on - strand, within B158DRAFT_1983 at 120.048 kb on + strand at 120.080 kb on + strand at 120.080 kb on + strand at 120.088 kb on - strand at 120.088 kb on - strand at 120.088 kb on - strand at 120.149 kb on - strand at 120.153 kb on + strand at 120.153 kb on + strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.325 kb on - strand at 120.327 kb on + strand at 120.335 kb on - strand, within B158DRAFT_1984 at 120.335 kb on - strand, within B158DRAFT_1984 at 120.387 kb on - strand, within B158DRAFT_1984 at 120.451 kb on - strand, within B158DRAFT_1984
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 117,755 + B158DRAFT_1981 0.34 -0.3 117,816 + B158DRAFT_1981 0.38 -0.1 117,922 + B158DRAFT_1981 0.46 -2.3 118,007 + B158DRAFT_1981 0.52 +0.7 118,007 + B158DRAFT_1981 0.52 +1.3 118,015 - B158DRAFT_1981 0.53 -0.5 118,051 - B158DRAFT_1981 0.55 -0.8 118,067 - B158DRAFT_1981 0.56 +1.7 118,191 - B158DRAFT_1981 0.65 -0.3 118,225 + B158DRAFT_1981 0.68 -1.1 118,225 + B158DRAFT_1981 0.68 -0.6 118,225 + B158DRAFT_1981 0.68 -1.0 118,233 - B158DRAFT_1981 0.68 -0.2 118,233 - B158DRAFT_1981 0.68 -1.5 118,233 - B158DRAFT_1981 0.68 -1.6 118,244 + B158DRAFT_1981 0.69 -0.1 118,317 + B158DRAFT_1981 0.75 -1.4 118,325 - B158DRAFT_1981 0.75 -1.1 118,325 - B158DRAFT_1981 0.75 -0.9 118,325 - B158DRAFT_1981 0.75 -1.0 118,325 - B158DRAFT_1981 0.75 -0.6 118,325 - B158DRAFT_1981 0.75 -0.2 118,352 - B158DRAFT_1981 0.77 -0.4 118,532 + -1.1 118,585 - -0.7 118,709 - -1.8 118,709 - -0.7 118,718 + -0.3 118,736 - -0.7 118,808 - +2.1 118,818 - B158DRAFT_1982 0.11 -0.2 118,833 + B158DRAFT_1982 0.13 -0.3 118,833 + B158DRAFT_1982 0.13 -0.2 118,833 + B158DRAFT_1982 0.13 -0.6 118,833 + B158DRAFT_1982 0.13 -0.6 118,833 + B158DRAFT_1982 0.13 +0.3 118,833 + B158DRAFT_1982 0.13 +0.6 118,833 + B158DRAFT_1982 0.13 -2.2 118,833 + B158DRAFT_1982 0.13 -1.7 118,833 + B158DRAFT_1982 0.13 +1.1 118,833 + B158DRAFT_1982 0.13 +0.7 118,833 + B158DRAFT_1982 0.13 -0.4 118,833 + B158DRAFT_1982 0.13 -1.0 118,841 - B158DRAFT_1982 0.14 -1.9 118,841 - B158DRAFT_1982 0.14 -0.7 118,841 - B158DRAFT_1982 0.14 +1.2 118,841 - B158DRAFT_1982 0.14 -0.9 118,841 - B158DRAFT_1982 0.14 -0.4 118,841 - B158DRAFT_1982 0.14 -0.1 118,841 - B158DRAFT_1982 0.14 -0.8 118,841 - B158DRAFT_1982 0.14 -1.6 118,841 - B158DRAFT_1982 0.14 +0.6 118,841 - B158DRAFT_1982 0.14 +0.4 118,841 - B158DRAFT_1982 0.14 +0.4 118,841 - B158DRAFT_1982 0.14 +1.1 118,841 - B158DRAFT_1982 0.14 -1.3 118,841 - B158DRAFT_1982 0.14 -1.2 118,926 + B158DRAFT_1982 0.26 -0.4 118,934 - B158DRAFT_1982 0.27 -1.4 118,934 - B158DRAFT_1982 0.27 +0.7 118,934 - B158DRAFT_1982 0.27 -1.8 118,961 + B158DRAFT_1982 0.31 -1.2 118,969 - B158DRAFT_1982 0.32 -1.0 118,969 - B158DRAFT_1982 0.32 -0.7 119,006 + B158DRAFT_1982 0.37 -0.9 119,009 - B158DRAFT_1982 0.38 -0.5 119,027 + B158DRAFT_1982 0.40 -2.2 119,063 - B158DRAFT_1982 0.45 -0.7 119,070 - B158DRAFT_1982 0.46 -0.6 119,070 - B158DRAFT_1982 0.46 -0.8 119,070 - B158DRAFT_1982 0.46 +0.8 119,115 + B158DRAFT_1982 0.53 -1.4 119,271 + B158DRAFT_1982 0.75 -1.3 119,271 + B158DRAFT_1982 0.75 -0.1 119,271 + B158DRAFT_1982 0.75 +0.1 119,271 + B158DRAFT_1982 0.75 +0.7 119,271 + B158DRAFT_1982 0.75 -1.5 119,271 + B158DRAFT_1982 0.75 -0.9 119,271 + B158DRAFT_1982 0.75 +0.7 119,271 + B158DRAFT_1982 0.75 -1.3 119,271 + B158DRAFT_1982 0.75 -1.5 119,279 - B158DRAFT_1982 0.76 -0.2 119,279 - B158DRAFT_1982 0.76 -0.9 119,279 - B158DRAFT_1982 0.76 -1.8 119,279 - B158DRAFT_1982 0.76 +0.2 119,279 - B158DRAFT_1982 0.76 +0.0 119,339 - B158DRAFT_1982 0.84 +0.6 119,442 - -0.7 119,480 + -1.3 119,480 + -3.0 119,480 + +0.4 119,488 + -0.8 119,488 - -0.8 119,488 - -0.4 119,488 - -0.9 119,488 - -0.2 119,491 - -1.7 119,491 - -2.2 119,546 - -0.2 119,606 + B158DRAFT_1983 0.18 -0.6 119,614 - B158DRAFT_1983 0.19 +0.4 119,642 + B158DRAFT_1983 0.24 -1.0 119,642 + B158DRAFT_1983 0.24 -1.6 119,642 + B158DRAFT_1983 0.24 -0.7 119,642 + B158DRAFT_1983 0.24 -0.9 119,644 + B158DRAFT_1983 0.24 +2.0 119,644 + B158DRAFT_1983 0.24 -0.4 119,644 + B158DRAFT_1983 0.24 +0.0 119,644 + B158DRAFT_1983 0.24 -2.3 119,644 + B158DRAFT_1983 0.24 -0.6 119,644 + B158DRAFT_1983 0.24 -0.9 119,644 + B158DRAFT_1983 0.24 +0.6 119,644 + B158DRAFT_1983 0.24 +0.9 119,650 - B158DRAFT_1983 0.25 -1.4 119,650 - B158DRAFT_1983 0.25 -0.2 119,650 - B158DRAFT_1983 0.25 -2.6 119,650 - B158DRAFT_1983 0.25 -0.9 119,650 - B158DRAFT_1983 0.25 -1.1 119,650 - B158DRAFT_1983 0.25 -0.4 119,650 - B158DRAFT_1983 0.25 +0.3 119,650 - B158DRAFT_1983 0.25 -0.1 119,650 - B158DRAFT_1983 0.25 -0.2 119,652 - B158DRAFT_1983 0.26 -0.0 119,652 - B158DRAFT_1983 0.26 -1.0 119,652 - B158DRAFT_1983 0.26 -0.2 119,652 - B158DRAFT_1983 0.26 -2.5 119,652 - B158DRAFT_1983 0.26 +0.4 119,652 - B158DRAFT_1983 0.26 -1.5 119,652 - B158DRAFT_1983 0.26 -0.3 119,652 - B158DRAFT_1983 0.26 -0.6 119,652 - B158DRAFT_1983 0.26 -0.2 119,652 - B158DRAFT_1983 0.26 -0.9 119,691 + B158DRAFT_1983 0.32 +0.1 119,785 - B158DRAFT_1983 0.48 +0.4 119,887 + B158DRAFT_1983 0.65 -0.4 119,892 + B158DRAFT_1983 0.66 +1.3 119,895 - B158DRAFT_1983 0.66 -1.3 119,895 - B158DRAFT_1983 0.66 -0.4 119,897 + B158DRAFT_1983 0.67 -0.3 119,897 + B158DRAFT_1983 0.67 -2.3 119,905 - B158DRAFT_1983 0.68 -1.3 119,915 - B158DRAFT_1983 0.70 -1.0 119,918 + B158DRAFT_1983 0.70 -2.0 119,997 + B158DRAFT_1983 0.84 -0.3 120,009 + B158DRAFT_1983 0.86 +0.7 120,015 + B158DRAFT_1983 0.87 +0.6 120,033 - B158DRAFT_1983 0.90 -0.0 120,048 + -0.2 120,080 + -0.5 120,080 + +0.0 120,088 - -2.0 120,088 - -0.2 120,088 - -0.8 120,149 - -0.2 120,153 + +2.4 120,153 + +1.9 120,161 - +2.0 120,161 - -0.6 120,161 - -0.8 120,161 - -2.0 120,189 + -0.7 120,189 + -1.6 120,189 + -0.6 120,189 + -1.7 120,189 + -0.6 120,189 + -0.1 120,189 + +0.1 120,189 + -1.7 120,189 + +0.2 120,189 + +0.2 120,189 + -1.9 120,189 + -2.4 120,189 + -0.9 120,189 + -1.9 120,189 + -1.0 120,189 + +0.5 120,189 + -0.7 120,189 + -2.2 120,189 + -0.1 120,189 + +0.5 120,189 + +0.2 120,189 + -0.3 120,189 + -1.8 120,189 + -2.2 120,189 + -0.2 120,189 + -0.8 120,189 + -0.6 120,189 + -1.6 120,189 + -1.7 120,189 + -1.8 120,197 - -0.0 120,197 - -0.8 120,197 - -1.0 120,197 - -0.6 120,197 - -0.6 120,197 - -1.2 120,197 - -0.6 120,197 - -1.6 120,197 - -0.8 120,197 - -0.5 120,197 - +1.9 120,197 - -0.4 120,197 - +1.0 120,197 - -1.3 120,197 - +0.5 120,197 - -0.3 120,197 - -0.9 120,197 - -1.5 120,197 - -0.6 120,197 - -1.8 120,197 - -0.6 120,197 - +1.1 120,197 - -0.0 120,197 - +0.5 120,197 - -1.9 120,197 - -2.4 120,197 - -1.7 120,197 - +1.4 120,197 - -0.8 120,197 - +0.7 120,197 - -0.9 120,197 - -1.6 120,325 - +0.6 120,327 + -2.0 120,335 - B158DRAFT_1984 0.10 -2.2 120,335 - B158DRAFT_1984 0.10 +0.2 120,387 - B158DRAFT_1984 0.17 -1.9 120,451 - B158DRAFT_1984 0.25 +0.8
Or see this region's nucleotide sequence