Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1922 and B158DRAFT_1923 are separated by 117 nucleotides B158DRAFT_1923 and B158DRAFT_1924 are separated by 93 nucleotides B158DRAFT_1924 and B158DRAFT_1925 are separated by 49 nucleotides
B158DRAFT_1922: B158DRAFT_1922 - Uncharacterized protein involved in outer membrane biogenesis, at 57,727 to 59,574
_1922
B158DRAFT_1923: B158DRAFT_1923 - hypothetical protein, at 59,692 to 60,450
_1923
B158DRAFT_1924: B158DRAFT_1924 - Methyltransferase domain., at 60,544 to 61,176
_1924
B158DRAFT_1925: B158DRAFT_1925 - ATPase components of ABC transporters with duplicated ATPase domains, at 61,226 to 63,136
_1925
Position (kb) 59
60
61 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 58.737 kb on + strand, within B158DRAFT_1922 at 58.807 kb on - strand, within B158DRAFT_1922 at 58.809 kb on + strand, within B158DRAFT_1922 at 58.817 kb on - strand, within B158DRAFT_1922 at 58.834 kb on - strand, within B158DRAFT_1922 at 58.850 kb on - strand, within B158DRAFT_1922 at 58.914 kb on - strand, within B158DRAFT_1922 at 58.914 kb on - strand, within B158DRAFT_1922 at 58.919 kb on - strand, within B158DRAFT_1922 at 58.929 kb on - strand, within B158DRAFT_1922 at 59.066 kb on + strand, within B158DRAFT_1922 at 59.066 kb on + strand, within B158DRAFT_1922 at 59.089 kb on + strand, within B158DRAFT_1922 at 59.134 kb on + strand, within B158DRAFT_1922 at 59.134 kb on + strand, within B158DRAFT_1922 at 59.134 kb on + strand, within B158DRAFT_1922 at 59.142 kb on - strand, within B158DRAFT_1922 at 59.142 kb on - strand, within B158DRAFT_1922 at 59.148 kb on - strand, within B158DRAFT_1922 at 59.150 kb on + strand, within B158DRAFT_1922 at 59.158 kb on - strand, within B158DRAFT_1922 at 59.158 kb on - strand, within B158DRAFT_1922 at 59.172 kb on - strand, within B158DRAFT_1922 at 59.193 kb on + strand, within B158DRAFT_1922 at 59.212 kb on + strand, within B158DRAFT_1922 at 59.224 kb on + strand, within B158DRAFT_1922 at 59.260 kb on + strand, within B158DRAFT_1922 at 59.280 kb on + strand, within B158DRAFT_1922 at 59.326 kb on - strand, within B158DRAFT_1922 at 59.331 kb on + strand, within B158DRAFT_1922 at 59.331 kb on + strand, within B158DRAFT_1922 at 59.396 kb on + strand at 59.404 kb on - strand at 59.417 kb on + strand at 59.425 kb on - strand at 59.480 kb on - strand at 59.511 kb on + strand at 59.511 kb on + strand at 59.519 kb on - strand at 59.573 kb on - strand at 59.630 kb on + strand at 59.638 kb on - strand at 59.638 kb on - strand at 59.783 kb on + strand, within B158DRAFT_1923 at 59.783 kb on + strand, within B158DRAFT_1923 at 59.783 kb on + strand, within B158DRAFT_1923 at 59.804 kb on + strand, within B158DRAFT_1923 at 60.002 kb on - strand, within B158DRAFT_1923 at 60.049 kb on - strand, within B158DRAFT_1923 at 60.149 kb on + strand, within B158DRAFT_1923 at 60.215 kb on - strand, within B158DRAFT_1923 at 60.224 kb on + strand, within B158DRAFT_1923 at 60.377 kb on + strand at 60.381 kb on + strand at 60.466 kb on + strand at 60.466 kb on + strand at 60.466 kb on + strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.474 kb on - strand at 60.542 kb on + strand at 60.542 kb on + strand at 60.550 kb on - strand at 60.623 kb on - strand, within B158DRAFT_1924 at 60.721 kb on + strand, within B158DRAFT_1924 at 60.731 kb on + strand, within B158DRAFT_1924 at 60.739 kb on - strand, within B158DRAFT_1924 at 60.863 kb on - strand, within B158DRAFT_1924 at 60.912 kb on - strand, within B158DRAFT_1924 at 60.990 kb on - strand, within B158DRAFT_1924 at 61.018 kb on + strand, within B158DRAFT_1924 at 61.050 kb on + strand, within B158DRAFT_1924 at 61.109 kb on + strand, within B158DRAFT_1924 at 61.117 kb on - strand at 61.153 kb on - strand at 61.166 kb on + strand at 61.172 kb on - strand at 61.172 kb on - strand at 61.174 kb on - strand at 61.179 kb on - strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.269 kb on + strand at 61.274 kb on + strand at 61.274 kb on + strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.277 kb on - strand at 61.282 kb on - strand at 61.287 kb on - strand at 61.418 kb on + strand, within B158DRAFT_1925 at 61.438 kb on + strand, within B158DRAFT_1925
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 58,737 + B158DRAFT_1922 0.55 +1.7 58,807 - B158DRAFT_1922 0.58 -1.6 58,809 + B158DRAFT_1922 0.59 -2.3 58,817 - B158DRAFT_1922 0.59 -0.9 58,834 - B158DRAFT_1922 0.60 -0.1 58,850 - B158DRAFT_1922 0.61 -0.9 58,914 - B158DRAFT_1922 0.64 +0.3 58,914 - B158DRAFT_1922 0.64 -1.5 58,919 - B158DRAFT_1922 0.65 -0.0 58,929 - B158DRAFT_1922 0.65 +1.3 59,066 + B158DRAFT_1922 0.72 -0.4 59,066 + B158DRAFT_1922 0.72 +0.0 59,089 + B158DRAFT_1922 0.74 +0.3 59,134 + B158DRAFT_1922 0.76 -0.3 59,134 + B158DRAFT_1922 0.76 +0.3 59,134 + B158DRAFT_1922 0.76 -1.1 59,142 - B158DRAFT_1922 0.77 -0.9 59,142 - B158DRAFT_1922 0.77 -3.5 59,148 - B158DRAFT_1922 0.77 -0.3 59,150 + B158DRAFT_1922 0.77 -1.3 59,158 - B158DRAFT_1922 0.77 -0.7 59,158 - B158DRAFT_1922 0.77 -0.6 59,172 - B158DRAFT_1922 0.78 -2.5 59,193 + B158DRAFT_1922 0.79 -1.4 59,212 + B158DRAFT_1922 0.80 -0.7 59,224 + B158DRAFT_1922 0.81 -0.2 59,260 + B158DRAFT_1922 0.83 -1.5 59,280 + B158DRAFT_1922 0.84 -0.5 59,326 - B158DRAFT_1922 0.87 -0.7 59,331 + B158DRAFT_1922 0.87 -0.8 59,331 + B158DRAFT_1922 0.87 +1.0 59,396 + +0.2 59,404 - -1.0 59,417 + -0.7 59,425 - -0.0 59,480 - +3.1 59,511 + -0.7 59,511 + -0.8 59,519 - -0.2 59,573 - +1.0 59,630 + -0.7 59,638 - -1.9 59,638 - -1.2 59,783 + B158DRAFT_1923 0.12 +0.4 59,783 + B158DRAFT_1923 0.12 -0.4 59,783 + B158DRAFT_1923 0.12 -0.7 59,804 + B158DRAFT_1923 0.15 -1.9 60,002 - B158DRAFT_1923 0.41 +1.1 60,049 - B158DRAFT_1923 0.47 +4.3 60,149 + B158DRAFT_1923 0.60 +4.3 60,215 - B158DRAFT_1923 0.69 +3.3 60,224 + B158DRAFT_1923 0.70 +0.7 60,377 + -1.2 60,381 + -0.6 60,466 + -0.3 60,466 + -0.5 60,466 + -1.7 60,474 - -0.3 60,474 - -1.2 60,474 - -2.1 60,474 - +0.4 60,542 + -1.0 60,542 + +1.2 60,550 - -1.6 60,623 - B158DRAFT_1924 0.12 -1.2 60,721 + B158DRAFT_1924 0.28 -1.4 60,731 + B158DRAFT_1924 0.30 -0.8 60,739 - B158DRAFT_1924 0.31 +0.0 60,863 - B158DRAFT_1924 0.50 +0.6 60,912 - B158DRAFT_1924 0.58 +0.7 60,990 - B158DRAFT_1924 0.70 -1.3 61,018 + B158DRAFT_1924 0.75 -0.4 61,050 + B158DRAFT_1924 0.80 +0.2 61,109 + B158DRAFT_1924 0.89 +0.4 61,117 - -0.5 61,153 - +2.3 61,166 + +0.2 61,172 - +0.4 61,172 - -0.9 61,174 - -1.4 61,179 - -0.3 61,269 + -1.7 61,269 + -2.3 61,269 + -2.6 61,269 + -1.9 61,269 + -0.8 61,269 + -1.5 61,269 + -1.6 61,274 + +0.5 61,274 + -0.2 61,277 - -1.2 61,277 - -1.6 61,277 - +1.4 61,277 - +0.8 61,277 - -2.5 61,277 - +1.5 61,277 - -1.1 61,277 - +1.0 61,277 - +0.9 61,277 - +1.3 61,277 - +0.3 61,282 - -1.8 61,287 - +0.8 61,418 + B158DRAFT_1925 0.10 -1.3 61,438 + B158DRAFT_1925 0.11 -1.8
Or see this region's nucleotide sequence