Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1819 and B158DRAFT_1820 are separated by 6 nucleotides B158DRAFT_1820 and B158DRAFT_1821 are separated by 550 nucleotides
B158DRAFT_1819: B158DRAFT_1819 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 1,917,130 to 1,918,467
_1819
B158DRAFT_1820: B158DRAFT_1820 - periplasmic chaperone LolA, at 1,918,474 to 1,919,157
_1820
B158DRAFT_1821: B158DRAFT_1821 - DNA segregation ATPase FtsK/SpoIIIE and related proteins, at 1,919,708 to 1,922,047
_1821
Position (kb)
1918
1919
1920 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1917.488 kb on - strand, within B158DRAFT_1819 at 1917.528 kb on + strand, within B158DRAFT_1819 at 1917.528 kb on + strand, within B158DRAFT_1819 at 1917.529 kb on + strand, within B158DRAFT_1819 at 1917.537 kb on - strand, within B158DRAFT_1819 at 1917.691 kb on - strand, within B158DRAFT_1819 at 1917.738 kb on + strand, within B158DRAFT_1819 at 1917.902 kb on + strand, within B158DRAFT_1819 at 1918.028 kb on - strand, within B158DRAFT_1819 at 1918.033 kb on + strand, within B158DRAFT_1819 at 1918.071 kb on + strand, within B158DRAFT_1819 at 1918.071 kb on + strand, within B158DRAFT_1819 at 1918.071 kb on + strand, within B158DRAFT_1819 at 1918.071 kb on + strand, within B158DRAFT_1819 at 1918.079 kb on - strand, within B158DRAFT_1819 at 1918.079 kb on - strand, within B158DRAFT_1819 at 1918.104 kb on - strand, within B158DRAFT_1819 at 1918.151 kb on + strand, within B158DRAFT_1819 at 1918.153 kb on - strand, within B158DRAFT_1819 at 1918.197 kb on + strand, within B158DRAFT_1819 at 1918.197 kb on - strand, within B158DRAFT_1819 at 1918.215 kb on - strand, within B158DRAFT_1819 at 1918.283 kb on + strand, within B158DRAFT_1819 at 1918.369 kb on + strand at 1918.377 kb on - strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.538 kb on - strand at 1918.538 kb on - strand at 1918.538 kb on - strand at 1919.189 kb on + strand at 1919.189 kb on + strand at 1919.189 kb on + strand at 1919.189 kb on + strand at 1919.197 kb on - strand at 1919.197 kb on - strand at 1919.207 kb on - strand at 1919.237 kb on + strand at 1919.263 kb on + strand at 1919.263 kb on + strand at 1919.271 kb on - strand at 1919.271 kb on - strand at 1919.403 kb on + strand at 1919.419 kb on + strand at 1919.440 kb on + strand at 1919.448 kb on - strand at 1919.474 kb on + strand at 1919.482 kb on - strand at 1919.646 kb on + strand at 1919.719 kb on - strand at 1919.738 kb on - strand at 1919.738 kb on - strand at 1919.748 kb on + strand at 1919.752 kb on - strand at 1919.754 kb on - strand at 1919.795 kb on + strand at 1919.813 kb on + strand at 1919.859 kb on + strand at 1919.867 kb on - strand at 1919.915 kb on + strand at 1919.923 kb on - strand at 1919.923 kb on - strand at 1919.953 kb on - strand, within B158DRAFT_1821 at 1919.980 kb on - strand, within B158DRAFT_1821 at 1920.077 kb on - strand, within B158DRAFT_1821 at 1920.080 kb on + strand, within B158DRAFT_1821 at 1920.083 kb on - strand, within B158DRAFT_1821 at 1920.096 kb on + strand, within B158DRAFT_1821 at 1920.098 kb on + strand, within B158DRAFT_1821 at 1920.106 kb on - strand, within B158DRAFT_1821 at 1920.106 kb on - strand, within B158DRAFT_1821 at 1920.135 kb on - strand, within B158DRAFT_1821 at 1920.142 kb on + strand, within B158DRAFT_1821 at 1920.153 kb on + strand, within B158DRAFT_1821
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 1,917,488 - B158DRAFT_1819 0.27 -0.2 1,917,528 + B158DRAFT_1819 0.30 +0.2 1,917,528 + B158DRAFT_1819 0.30 -0.0 1,917,529 + B158DRAFT_1819 0.30 -0.6 1,917,537 - B158DRAFT_1819 0.30 -1.9 1,917,691 - B158DRAFT_1819 0.42 -1.0 1,917,738 + B158DRAFT_1819 0.45 +1.8 1,917,902 + B158DRAFT_1819 0.58 -0.7 1,918,028 - B158DRAFT_1819 0.67 -0.3 1,918,033 + B158DRAFT_1819 0.67 +1.1 1,918,071 + B158DRAFT_1819 0.70 -0.0 1,918,071 + B158DRAFT_1819 0.70 -1.3 1,918,071 + B158DRAFT_1819 0.70 -0.5 1,918,071 + B158DRAFT_1819 0.70 -0.8 1,918,079 - B158DRAFT_1819 0.71 +0.2 1,918,079 - B158DRAFT_1819 0.71 -1.8 1,918,104 - B158DRAFT_1819 0.73 -1.3 1,918,151 + B158DRAFT_1819 0.76 +0.6 1,918,153 - B158DRAFT_1819 0.76 -2.0 1,918,197 + B158DRAFT_1819 0.80 -0.6 1,918,197 - B158DRAFT_1819 0.80 -0.3 1,918,215 - B158DRAFT_1819 0.81 +0.9 1,918,283 + B158DRAFT_1819 0.86 -2.3 1,918,369 + -0.8 1,918,377 - -1.1 1,918,530 + -0.4 1,918,530 + +0.5 1,918,530 + -1.9 1,918,530 + -0.4 1,918,530 + -0.5 1,918,530 + -0.1 1,918,530 + -0.5 1,918,530 + -1.1 1,918,538 - -1.4 1,918,538 - -0.0 1,918,538 - -0.4 1,919,189 + +1.7 1,919,189 + +0.8 1,919,189 + +0.5 1,919,189 + -0.1 1,919,197 - +1.8 1,919,197 - -0.3 1,919,207 - -0.0 1,919,237 + -2.9 1,919,263 + -1.3 1,919,263 + -1.0 1,919,271 - -1.4 1,919,271 - +1.3 1,919,403 + -2.5 1,919,419 + -2.5 1,919,440 + -0.2 1,919,448 - -0.9 1,919,474 + -1.1 1,919,482 - -0.9 1,919,646 + -0.8 1,919,719 - +0.5 1,919,738 - -1.3 1,919,738 - +0.4 1,919,748 + -1.3 1,919,752 - +1.3 1,919,754 - -1.5 1,919,795 + +1.1 1,919,813 + +1.7 1,919,859 + -1.4 1,919,867 - +0.8 1,919,915 + +0.1 1,919,923 - -0.3 1,919,923 - +1.5 1,919,953 - B158DRAFT_1821 0.10 +0.7 1,919,980 - B158DRAFT_1821 0.12 +0.4 1,920,077 - B158DRAFT_1821 0.16 +1.5 1,920,080 + B158DRAFT_1821 0.16 -1.5 1,920,083 - B158DRAFT_1821 0.16 -0.8 1,920,096 + B158DRAFT_1821 0.17 -1.2 1,920,098 + B158DRAFT_1821 0.17 -0.8 1,920,106 - B158DRAFT_1821 0.17 -0.3 1,920,106 - B158DRAFT_1821 0.17 +1.7 1,920,135 - B158DRAFT_1821 0.18 -1.8 1,920,142 + B158DRAFT_1821 0.19 -0.5 1,920,153 + B158DRAFT_1821 0.19 +0.7
Or see this region's nucleotide sequence