Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1755

Experiment: m.b. nitrite 20 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1754 and B158DRAFT_1755 are separated by 373 nucleotidesB158DRAFT_1755 and B158DRAFT_1756 are separated by 132 nucleotides B158DRAFT_1754: B158DRAFT_1754 - malonyl CoA-acyl carrier protein transacylase, at 1,836,849 to 1,837,778 _1754 B158DRAFT_1755: B158DRAFT_1755 - 3-oxoacyl-(acyl-carrier-protein) synthase III, at 1,838,152 to 1,839,114 _1755 B158DRAFT_1756: B158DRAFT_1756 - phosphate:acyl-[acyl carrier protein] acyltransferase, at 1,839,247 to 1,840,284 _1756 Position (kb) 1838 1839 1840Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1837.904 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.973 kb on - strandat 1837.973 kb on - strandat 1837.978 kb on - strandat 1838.013 kb on + strandat 1838.033 kb on - strandat 1838.041 kb on - strandat 1838.041 kb on - strandat 1838.046 kb on - strandat 1838.064 kb on - strandat 1838.064 kb on - strandat 1838.064 kb on - strandat 1838.064 kb on - strandat 1838.064 kb on - strandat 1838.111 kb on - strandat 1838.145 kb on - strandat 1839.215 kb on - strandat 1839.233 kb on - strandat 1839.274 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
remove
1,837,904 - +0.1
1,837,935 - +0.8
1,837,935 - -0.3
1,837,935 - -0.5
1,837,935 - -1.9
1,837,935 - +0.2
1,837,935 - -2.7
1,837,973 - -1.5
1,837,973 - -0.3
1,837,978 - +1.4
1,838,013 + +0.8
1,838,033 - +0.6
1,838,041 - -0.2
1,838,041 - -0.3
1,838,046 - +0.2
1,838,064 - -1.8
1,838,064 - -0.7
1,838,064 - +1.0
1,838,064 - +1.0
1,838,064 - -0.1
1,838,111 - -1.3
1,838,145 - -0.2
1,839,215 - +1.0
1,839,233 - +3.5
1,839,274 - +0.8

Or see this region's nucleotide sequence