Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1754

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1753 and B158DRAFT_1754 are separated by 38 nucleotidesB158DRAFT_1754 and B158DRAFT_1755 are separated by 373 nucleotides B158DRAFT_1753: B158DRAFT_1753 - 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100), at 1,836,064 to 1,836,810 _1753 B158DRAFT_1754: B158DRAFT_1754 - malonyl CoA-acyl carrier protein transacylase, at 1,836,849 to 1,837,778 _1754 B158DRAFT_1755: B158DRAFT_1755 - 3-oxoacyl-(acyl-carrier-protein) synthase III, at 1,838,152 to 1,839,114 _1755 Position (kb) 1836 1837 1838Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 1835.871 kb on + strandat 1835.871 kb on + strandat 1835.871 kb on + strandat 1835.871 kb on + strandat 1835.941 kb on + strandat 1835.941 kb on + strandat 1835.941 kb on + strandat 1835.949 kb on - strandat 1835.949 kb on - strandat 1835.949 kb on - strandat 1835.974 kb on + strandat 1836.020 kb on + strandat 1836.070 kb on - strandat 1836.820 kb on - strandat 1836.906 kb on - strandat 1837.904 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.935 kb on - strandat 1837.973 kb on - strandat 1837.973 kb on - strandat 1837.978 kb on - strandat 1838.013 kb on + strandat 1838.033 kb on - strandat 1838.041 kb on - strandat 1838.041 kb on - strandat 1838.046 kb on - strandat 1838.064 kb on - strandat 1838.064 kb on - strandat 1838.064 kb on - strandat 1838.064 kb on - strandat 1838.064 kb on - strandat 1838.111 kb on - strandat 1838.145 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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1,835,871 + +2.0
1,835,871 + +0.5
1,835,871 + +2.3
1,835,871 + +2.7
1,835,941 + +5.3
1,835,941 + +5.5
1,835,941 + +5.4
1,835,949 - +5.9
1,835,949 - +6.4
1,835,949 - +6.2
1,835,974 + -0.1
1,836,020 + -2.0
1,836,070 - -0.6
1,836,820 - +4.3
1,836,906 - +0.4
1,837,904 - +0.1
1,837,935 - +0.8
1,837,935 - -0.3
1,837,935 - -0.5
1,837,935 - -1.9
1,837,935 - +0.2
1,837,935 - -2.7
1,837,973 - -1.5
1,837,973 - -0.3
1,837,978 - +1.4
1,838,013 + +0.8
1,838,033 - +0.6
1,838,041 - -0.2
1,838,041 - -0.3
1,838,046 - +0.2
1,838,064 - -1.8
1,838,064 - -0.7
1,838,064 - +1.0
1,838,064 - +1.0
1,838,064 - -0.1
1,838,111 - -1.3
1,838,145 - -0.2

Or see this region's nucleotide sequence