Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1598 and B158DRAFT_1599 are separated by 31 nucleotides B158DRAFT_1599 and B158DRAFT_1600 overlap by 11 nucleotides B158DRAFT_1600 and B158DRAFT_1601 overlap by 11 nucleotides B158DRAFT_1601 and B158DRAFT_1602 are separated by 30 nucleotides
B158DRAFT_1598: B158DRAFT_1598 - lipid A export permease/ATP-binding protein MsbA, at 1,658,006 to 1,659,754
_1598
B158DRAFT_1599: B158DRAFT_1599 - lipid-A-disaccharide kinase (EC 2.7.1.130), at 1,659,786 to 1,660,751
_1599
B158DRAFT_1600: B158DRAFT_1600 - Uncharacterized conserved protein, at 1,660,741 to 1,660,926
_1600
B158DRAFT_1601: B158DRAFT_1601 - 3-deoxy-D-manno-octulosonate cytidylyltransferase, at 1,660,916 to 1,661,686
_1601
B158DRAFT_1602: B158DRAFT_1602 - Protein-tyrosine-phosphatase, at 1,661,717 to 1,662,202
_1602
Position (kb)
1659
1660
1661 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1659.732 kb on + strand at 1659.777 kb on + strand at 1659.777 kb on + strand at 1659.777 kb on + strand at 1659.777 kb on + strand at 1659.782 kb on + strand at 1660.724 kb on + strand at 1660.724 kb on + strand at 1661.644 kb on + strand at 1661.670 kb on - strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.749 kb on + strand at 1661.749 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 1,659,732 + +2.7 1,659,777 + +4.3 1,659,777 + -1.0 1,659,777 + -0.2 1,659,777 + +3.3 1,659,782 + -1.5 1,660,724 + -1.0 1,660,724 + +0.2 1,661,644 + -2.2 1,661,670 - +0.7 1,661,708 + +0.5 1,661,708 + +0.5 1,661,708 + -0.9 1,661,708 + -0.1 1,661,708 + -2.0 1,661,708 + +1.2 1,661,708 + -0.4 1,661,708 + -0.6 1,661,708 + -1.0 1,661,716 - -1.3 1,661,716 - -0.6 1,661,716 - -0.8 1,661,749 + -0.6 1,661,749 + -2.2
Or see this region's nucleotide sequence