Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1437 and B158DRAFT_1438 are separated by 48 nucleotides B158DRAFT_1438 and B158DRAFT_1439 overlap by 29 nucleotides
B158DRAFT_1437: B158DRAFT_1437 - imidazolonepropionase (EC 3.5.2.7), at 1,488,416 to 1,489,645
_1437
B158DRAFT_1438: B158DRAFT_1438 - formiminoglutamate deiminase, at 1,489,694 to 1,491,103
_1438
B158DRAFT_1439: B158DRAFT_1439 - hypothetical protein, at 1,491,075 to 1,492,811
_1439
Position (kb)
1489
1490
1491
1492 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1488.759 kb on + strand, within B158DRAFT_1437 at 1488.759 kb on + strand, within B158DRAFT_1437 at 1488.862 kb on + strand, within B158DRAFT_1437 at 1488.863 kb on + strand, within B158DRAFT_1437 at 1488.867 kb on + strand, within B158DRAFT_1437 at 1488.875 kb on - strand, within B158DRAFT_1437 at 1488.899 kb on + strand, within B158DRAFT_1437 at 1488.912 kb on + strand, within B158DRAFT_1437 at 1488.921 kb on - strand, within B158DRAFT_1437 at 1488.930 kb on - strand, within B158DRAFT_1437 at 1488.952 kb on + strand, within B158DRAFT_1437 at 1488.952 kb on + strand, within B158DRAFT_1437 at 1489.001 kb on - strand, within B158DRAFT_1437 at 1489.001 kb on - strand, within B158DRAFT_1437 at 1489.027 kb on - strand, within B158DRAFT_1437 at 1489.085 kb on - strand, within B158DRAFT_1437 at 1489.093 kb on - strand, within B158DRAFT_1437 at 1489.181 kb on + strand, within B158DRAFT_1437 at 1489.222 kb on - strand, within B158DRAFT_1437 at 1489.286 kb on - strand, within B158DRAFT_1437 at 1489.288 kb on + strand, within B158DRAFT_1437 at 1489.288 kb on + strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.313 kb on + strand, within B158DRAFT_1437 at 1489.313 kb on + strand, within B158DRAFT_1437 at 1489.394 kb on + strand, within B158DRAFT_1437 at 1489.402 kb on + strand, within B158DRAFT_1437 at 1489.428 kb on - strand, within B158DRAFT_1437 at 1489.469 kb on + strand, within B158DRAFT_1437 at 1489.477 kb on - strand, within B158DRAFT_1437 at 1489.477 kb on - strand, within B158DRAFT_1437 at 1489.488 kb on + strand, within B158DRAFT_1437 at 1489.533 kb on - strand at 1489.589 kb on + strand at 1489.624 kb on - strand at 1489.669 kb on + strand at 1489.677 kb on - strand at 1489.740 kb on - strand at 1489.750 kb on - strand at 1489.768 kb on + strand at 1489.776 kb on - strand at 1489.909 kb on + strand, within B158DRAFT_1438 at 1489.970 kb on + strand, within B158DRAFT_1438 at 1490.120 kb on + strand, within B158DRAFT_1438 at 1490.322 kb on + strand, within B158DRAFT_1438 at 1490.322 kb on + strand, within B158DRAFT_1438 at 1490.328 kb on - strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.368 kb on - strand, within B158DRAFT_1438 at 1490.381 kb on + strand, within B158DRAFT_1438 at 1490.381 kb on - strand, within B158DRAFT_1438 at 1490.391 kb on - strand, within B158DRAFT_1438 at 1490.393 kb on + strand, within B158DRAFT_1438 at 1490.444 kb on + strand, within B158DRAFT_1438 at 1490.462 kb on - strand, within B158DRAFT_1438 at 1490.473 kb on + strand, within B158DRAFT_1438 at 1490.480 kb on + strand, within B158DRAFT_1438 at 1490.481 kb on - strand, within B158DRAFT_1438 at 1490.483 kb on - strand, within B158DRAFT_1438 at 1490.505 kb on + strand, within B158DRAFT_1438 at 1490.537 kb on + strand, within B158DRAFT_1438 at 1490.555 kb on - strand, within B158DRAFT_1438 at 1490.657 kb on + strand, within B158DRAFT_1438 at 1490.722 kb on - strand, within B158DRAFT_1438 at 1490.724 kb on + strand, within B158DRAFT_1438 at 1490.724 kb on + strand, within B158DRAFT_1438 at 1490.732 kb on - strand, within B158DRAFT_1438 at 1490.732 kb on - strand, within B158DRAFT_1438 at 1490.804 kb on - strand, within B158DRAFT_1438 at 1490.893 kb on + strand, within B158DRAFT_1438 at 1490.901 kb on - strand, within B158DRAFT_1438 at 1491.120 kb on - strand at 1491.130 kb on - strand at 1491.130 kb on - strand at 1491.464 kb on + strand, within B158DRAFT_1439 at 1491.464 kb on + strand, within B158DRAFT_1439 at 1491.472 kb on - strand, within B158DRAFT_1439 at 1491.472 kb on - strand, within B158DRAFT_1439 at 1491.478 kb on + strand, within B158DRAFT_1439 at 1491.743 kb on - strand, within B158DRAFT_1439 at 1491.769 kb on + strand, within B158DRAFT_1439 at 1491.769 kb on + strand, within B158DRAFT_1439 at 1491.777 kb on - strand, within B158DRAFT_1439 at 1491.777 kb on - strand, within B158DRAFT_1439 at 1491.777 kb on - strand, within B158DRAFT_1439 at 1491.784 kb on - strand, within B158DRAFT_1439 at 1491.859 kb on + strand, within B158DRAFT_1439 at 1491.859 kb on + strand, within B158DRAFT_1439 at 1491.909 kb on + strand, within B158DRAFT_1439 at 1491.924 kb on - strand, within B158DRAFT_1439 at 1491.977 kb on + strand, within B158DRAFT_1439 at 1491.987 kb on - strand, within B158DRAFT_1439 at 1492.044 kb on + strand, within B158DRAFT_1439 at 1492.078 kb on + strand, within B158DRAFT_1439 at 1492.086 kb on - strand, within B158DRAFT_1439 at 1492.086 kb on - strand, within B158DRAFT_1439 at 1492.091 kb on - strand, within B158DRAFT_1439 at 1492.092 kb on - strand, within B158DRAFT_1439
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 1,488,759 + B158DRAFT_1437 0.28 +0.4 1,488,759 + B158DRAFT_1437 0.28 -2.9 1,488,862 + B158DRAFT_1437 0.36 -1.1 1,488,863 + B158DRAFT_1437 0.36 -1.6 1,488,867 + B158DRAFT_1437 0.37 -1.6 1,488,875 - B158DRAFT_1437 0.37 +0.7 1,488,899 + B158DRAFT_1437 0.39 +0.6 1,488,912 + B158DRAFT_1437 0.40 +2.0 1,488,921 - B158DRAFT_1437 0.41 -0.7 1,488,930 - B158DRAFT_1437 0.42 +0.0 1,488,952 + B158DRAFT_1437 0.44 +0.5 1,488,952 + B158DRAFT_1437 0.44 +0.1 1,489,001 - B158DRAFT_1437 0.48 -2.2 1,489,001 - B158DRAFT_1437 0.48 -0.6 1,489,027 - B158DRAFT_1437 0.50 -1.7 1,489,085 - B158DRAFT_1437 0.54 -0.9 1,489,093 - B158DRAFT_1437 0.55 -0.7 1,489,181 + B158DRAFT_1437 0.62 -1.2 1,489,222 - B158DRAFT_1437 0.66 -2.1 1,489,286 - B158DRAFT_1437 0.71 +0.1 1,489,288 + B158DRAFT_1437 0.71 +0.2 1,489,288 + B158DRAFT_1437 0.71 -1.2 1,489,296 - B158DRAFT_1437 0.72 -1.6 1,489,296 - B158DRAFT_1437 0.72 +0.6 1,489,296 - B158DRAFT_1437 0.72 -0.5 1,489,296 - B158DRAFT_1437 0.72 -1.9 1,489,313 + B158DRAFT_1437 0.73 +0.6 1,489,313 + B158DRAFT_1437 0.73 +0.1 1,489,394 + B158DRAFT_1437 0.80 -3.0 1,489,402 + B158DRAFT_1437 0.80 -0.7 1,489,428 - B158DRAFT_1437 0.82 +1.5 1,489,469 + B158DRAFT_1437 0.86 -1.5 1,489,477 - B158DRAFT_1437 0.86 -0.3 1,489,477 - B158DRAFT_1437 0.86 -1.2 1,489,488 + B158DRAFT_1437 0.87 -1.6 1,489,533 - -2.3 1,489,589 + -0.4 1,489,624 - -1.8 1,489,669 + -0.9 1,489,677 - -0.2 1,489,740 - -0.9 1,489,750 - -2.1 1,489,768 + -1.2 1,489,776 - -0.2 1,489,909 + B158DRAFT_1438 0.15 -0.5 1,489,970 + B158DRAFT_1438 0.20 -0.6 1,490,120 + B158DRAFT_1438 0.30 -0.6 1,490,322 + B158DRAFT_1438 0.45 -1.0 1,490,322 + B158DRAFT_1438 0.45 -1.0 1,490,328 - B158DRAFT_1438 0.45 -0.0 1,490,360 + B158DRAFT_1438 0.47 +1.0 1,490,360 + B158DRAFT_1438 0.47 -0.5 1,490,360 + B158DRAFT_1438 0.47 +0.4 1,490,368 - B158DRAFT_1438 0.48 -1.5 1,490,381 + B158DRAFT_1438 0.49 -0.3 1,490,381 - B158DRAFT_1438 0.49 -1.3 1,490,391 - B158DRAFT_1438 0.49 -0.8 1,490,393 + B158DRAFT_1438 0.50 -1.5 1,490,444 + B158DRAFT_1438 0.53 -0.8 1,490,462 - B158DRAFT_1438 0.54 -0.6 1,490,473 + B158DRAFT_1438 0.55 +0.9 1,490,480 + B158DRAFT_1438 0.56 -0.9 1,490,481 - B158DRAFT_1438 0.56 -1.2 1,490,483 - B158DRAFT_1438 0.56 -0.1 1,490,505 + B158DRAFT_1438 0.58 +0.5 1,490,537 + B158DRAFT_1438 0.60 -2.5 1,490,555 - B158DRAFT_1438 0.61 +0.7 1,490,657 + B158DRAFT_1438 0.68 -0.5 1,490,722 - B158DRAFT_1438 0.73 +1.0 1,490,724 + B158DRAFT_1438 0.73 -1.2 1,490,724 + B158DRAFT_1438 0.73 -0.9 1,490,732 - B158DRAFT_1438 0.74 -1.8 1,490,732 - B158DRAFT_1438 0.74 -1.6 1,490,804 - B158DRAFT_1438 0.79 -1.1 1,490,893 + B158DRAFT_1438 0.85 -0.4 1,490,901 - B158DRAFT_1438 0.86 -0.8 1,491,120 - -0.2 1,491,130 - +0.8 1,491,130 - -0.8 1,491,464 + B158DRAFT_1439 0.22 -0.8 1,491,464 + B158DRAFT_1439 0.22 -0.4 1,491,472 - B158DRAFT_1439 0.23 -2.1 1,491,472 - B158DRAFT_1439 0.23 -1.6 1,491,478 + B158DRAFT_1439 0.23 -2.4 1,491,743 - B158DRAFT_1439 0.38 +2.1 1,491,769 + B158DRAFT_1439 0.40 +0.1 1,491,769 + B158DRAFT_1439 0.40 -1.1 1,491,777 - B158DRAFT_1439 0.40 +0.4 1,491,777 - B158DRAFT_1439 0.40 +0.7 1,491,777 - B158DRAFT_1439 0.40 -1.2 1,491,784 - B158DRAFT_1439 0.41 -0.7 1,491,859 + B158DRAFT_1439 0.45 -1.1 1,491,859 + B158DRAFT_1439 0.45 +1.7 1,491,909 + B158DRAFT_1439 0.48 -3.3 1,491,924 - B158DRAFT_1439 0.49 -0.6 1,491,977 + B158DRAFT_1439 0.52 -0.1 1,491,987 - B158DRAFT_1439 0.53 +0.8 1,492,044 + B158DRAFT_1439 0.56 -0.7 1,492,078 + B158DRAFT_1439 0.58 -0.5 1,492,086 - B158DRAFT_1439 0.58 -0.4 1,492,086 - B158DRAFT_1439 0.58 -0.4 1,492,091 - B158DRAFT_1439 0.58 -1.5 1,492,092 - B158DRAFT_1439 0.59 -0.1
Or see this region's nucleotide sequence