Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1424

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1423 and B158DRAFT_1424 are separated by 289 nucleotidesB158DRAFT_1424 and B158DRAFT_1425 are separated by 38 nucleotides B158DRAFT_1423: B158DRAFT_1423 - succinate dehydrogenase and fumarate reductase iron-sulfur protein, at 1,469,414 to 1,470,112 _1423 B158DRAFT_1424: B158DRAFT_1424 - 2-oxoglutarate dehydrogenase, E1 component, at 1,470,402 to 1,473,221 _1424 B158DRAFT_1425: B158DRAFT_1425 - 2-oxoglutarate dehydrogenase E2 component (EC 2.3.1.61), at 1,473,260 to 1,474,507 _1425 Position (kb) 1470 1471 1472 1473 1474Strain fitness (log2 ratio) -1 0 1 2at 1470.107 kb on + strandat 1470.107 kb on + strandat 1470.115 kb on - strandat 1470.147 kb on + strandat 1470.155 kb on + strandat 1470.170 kb on - strandat 1470.240 kb on + strandat 1470.347 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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1,470,107 + +1.8
1,470,107 + +1.1
1,470,115 - +1.1
1,470,147 + +0.4
1,470,155 + +0.5
1,470,170 - +0.0
1,470,240 + +0.9
1,470,347 - +2.3

Or see this region's nucleotide sequence