Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1226

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1225 and B158DRAFT_1226 are separated by 139 nucleotidesB158DRAFT_1226 and B158DRAFT_1227 are separated by 306 nucleotides B158DRAFT_1225: B158DRAFT_1225 - Ribonucleotide reductase, beta subunit, at 1,262,258 to 1,263,517 _1225 B158DRAFT_1226: B158DRAFT_1226 - ribonucleoside-diphosphate reductase, alpha subunit, at 1,263,657 to 1,266,533 _1226 B158DRAFT_1227: B158DRAFT_1227 - ABC-type spermidine/putrescine transport systems, ATPase components, at 1,266,840 to 1,267,910 _1227 Position (kb) 1263 1264 1265 1266 1267Strain fitness (log2 ratio) -1 0 1 2 3 4at 1266.763 kb on + strandat 1266.763 kb on + strandat 1266.763 kb on + strandat 1266.763 kb on + strandat 1266.763 kb on + strandat 1266.771 kb on - strandat 1266.771 kb on - strandat 1266.771 kb on - strandat 1266.771 kb on - strandat 1266.772 kb on + strandat 1266.783 kb on + strandat 1266.783 kb on + strandat 1266.791 kb on - strandat 1266.797 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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1,266,763 + +0.5
1,266,763 + +2.2
1,266,763 + +4.6
1,266,763 + +2.8
1,266,763 + +3.0
1,266,771 - +2.9
1,266,771 - +2.7
1,266,771 - +3.0
1,266,771 - +2.9
1,266,772 + +0.5
1,266,783 + -0.3
1,266,783 + +1.6
1,266,791 - -0.3
1,266,797 - -0.1

Or see this region's nucleotide sequence