Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0909

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0908 and B158DRAFT_0909 are separated by 375 nucleotidesB158DRAFT_0909 and B158DRAFT_0910 are separated by 62 nucleotides B158DRAFT_0908: B158DRAFT_0908 - Uncharacterized protein conserved in bacteria containing a pentein-type domain, at 931,708 to 932,748 _0908 B158DRAFT_0909: B158DRAFT_0909 - Transcriptional regulator, at 933,124 to 934,029 _0909 B158DRAFT_0910: B158DRAFT_0910 - Glutamate dehydrogenase/leucine dehydrogenase, at 934,092 to 935,381 _0910 Position (kb) 933 934 935Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 932.124 kb on - strand, within B158DRAFT_0908at 932.124 kb on - strand, within B158DRAFT_0908at 932.236 kb on - strand, within B158DRAFT_0908at 932.310 kb on + strand, within B158DRAFT_0908at 932.351 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.398 kb on + strand, within B158DRAFT_0908at 932.430 kb on + strand, within B158DRAFT_0908at 932.445 kb on - strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.533 kb on + strand, within B158DRAFT_0908at 932.621 kb on - strand, within B158DRAFT_0908at 932.746 kb on + strandat 932.800 kb on - strandat 932.851 kb on + strandat 932.857 kb on + strandat 932.857 kb on + strandat 932.859 kb on - strandat 932.865 kb on - strandat 932.954 kb on - strandat 933.029 kb on + strandat 933.126 kb on + strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.142 kb on - strandat 933.152 kb on + strandat 933.189 kb on - strandat 933.321 kb on - strand, within B158DRAFT_0909at 933.368 kb on + strand, within B158DRAFT_0909at 933.381 kb on + strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.460 kb on - strand, within B158DRAFT_0909at 933.571 kb on + strand, within B158DRAFT_0909at 933.665 kb on + strand, within B158DRAFT_0909at 933.673 kb on - strand, within B158DRAFT_0909at 933.737 kb on + strand, within B158DRAFT_0909at 933.752 kb on - strand, within B158DRAFT_0909at 933.775 kb on + strand, within B158DRAFT_0909at 933.775 kb on + strand, within B158DRAFT_0909at 933.822 kb on + strand, within B158DRAFT_0909at 933.822 kb on + strand, within B158DRAFT_0909at 933.822 kb on + strand, within B158DRAFT_0909at 933.822 kb on + strand, within B158DRAFT_0909at 933.822 kb on + strand, within B158DRAFT_0909at 933.822 kb on + strand, within B158DRAFT_0909at 933.825 kb on - strand, within B158DRAFT_0909at 933.830 kb on + strand, within B158DRAFT_0909at 933.830 kb on - strand, within B158DRAFT_0909at 933.830 kb on - strand, within B158DRAFT_0909at 933.830 kb on - strand, within B158DRAFT_0909at 933.830 kb on - strand, within B158DRAFT_0909at 933.944 kb on + strandat 933.953 kb on + strandat 934.062 kb on - strandat 934.122 kb on + strandat 934.172 kb on - strandat 934.172 kb on - strandat 934.193 kb on + strandat 934.193 kb on + strandat 934.278 kb on + strand, within B158DRAFT_0910at 934.291 kb on - strand, within B158DRAFT_0910at 934.293 kb on + strand, within B158DRAFT_0910at 934.293 kb on + strand, within B158DRAFT_0910at 934.301 kb on - strand, within B158DRAFT_0910at 934.301 kb on - strand, within B158DRAFT_0910at 934.301 kb on - strand, within B158DRAFT_0910at 934.301 kb on - strand, within B158DRAFT_0910at 934.301 kb on - strand, within B158DRAFT_0910at 934.301 kb on - strand, within B158DRAFT_0910at 934.317 kb on - strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.319 kb on + strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.327 kb on - strand, within B158DRAFT_0910at 934.341 kb on - strand, within B158DRAFT_0910at 934.346 kb on - strand, within B158DRAFT_0910at 934.346 kb on - strand, within B158DRAFT_0910at 934.395 kb on + strand, within B158DRAFT_0910at 934.435 kb on + strand, within B158DRAFT_0910at 934.468 kb on + strand, within B158DRAFT_0910at 934.471 kb on - strand, within B158DRAFT_0910at 934.528 kb on - strand, within B158DRAFT_0910at 934.550 kb on + strand, within B158DRAFT_0910at 934.563 kb on - strand, within B158DRAFT_0910at 934.565 kb on - strand, within B158DRAFT_0910at 934.577 kb on + strand, within B158DRAFT_0910at 934.579 kb on + strand, within B158DRAFT_0910at 934.579 kb on + strand, within B158DRAFT_0910at 934.579 kb on + strand, within B158DRAFT_0910at 934.579 kb on + strand, within B158DRAFT_0910at 934.587 kb on - strand, within B158DRAFT_0910at 934.587 kb on - strand, within B158DRAFT_0910at 934.587 kb on - strand, within B158DRAFT_0910at 934.587 kb on - strand, within B158DRAFT_0910at 934.625 kb on + strand, within B158DRAFT_0910at 934.625 kb on + strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.711 kb on - strand, within B158DRAFT_0910at 934.724 kb on - strand, within B158DRAFT_0910at 934.742 kb on - strand, within B158DRAFT_0910at 934.795 kb on - strand, within B158DRAFT_0910at 934.802 kb on + strand, within B158DRAFT_0910at 934.802 kb on + strand, within B158DRAFT_0910at 934.810 kb on - strand, within B158DRAFT_0910at 934.826 kb on + strand, within B158DRAFT_0910at 934.827 kb on + strand, within B158DRAFT_0910at 934.850 kb on + strand, within B158DRAFT_0910at 934.851 kb on + strand, within B158DRAFT_0910at 934.851 kb on + strand, within B158DRAFT_0910at 934.852 kb on + strand, within B158DRAFT_0910at 934.852 kb on + strand, within B158DRAFT_0910at 934.942 kb on + strand, within B158DRAFT_0910at 934.949 kb on + strand, within B158DRAFT_0910at 934.950 kb on - strand, within B158DRAFT_0910at 934.975 kb on + strand, within B158DRAFT_0910at 934.975 kb on + strand, within B158DRAFT_0910at 934.983 kb on - strand, within B158DRAFT_0910at 934.983 kb on - strand, within B158DRAFT_0910at 934.983 kb on - strand, within B158DRAFT_0910

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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932,124 - B158DRAFT_0908 0.40 +1.7
932,124 - B158DRAFT_0908 0.40 -0.9
932,236 - B158DRAFT_0908 0.51 -0.3
932,310 + B158DRAFT_0908 0.58 -0.8
932,351 + B158DRAFT_0908 0.62 +2.2
932,358 + B158DRAFT_0908 0.62 -2.0
932,358 + B158DRAFT_0908 0.62 -1.0
932,358 + B158DRAFT_0908 0.62 -1.7
932,398 + B158DRAFT_0908 0.66 -0.4
932,430 + B158DRAFT_0908 0.69 -1.7
932,445 - B158DRAFT_0908 0.71 +0.3
932,517 + B158DRAFT_0908 0.78 -0.7
932,517 + B158DRAFT_0908 0.78 -0.2
932,517 + B158DRAFT_0908 0.78 -0.6
932,517 + B158DRAFT_0908 0.78 -1.1
932,525 - B158DRAFT_0908 0.78 -2.1
932,525 - B158DRAFT_0908 0.78 +0.2
932,525 - B158DRAFT_0908 0.78 -0.6
932,533 + B158DRAFT_0908 0.79 +0.7
932,621 - B158DRAFT_0908 0.88 -0.4
932,746 + +2.9
932,800 - +3.7
932,851 + +4.1
932,857 + +3.3
932,857 + +3.4
932,859 - +3.2
932,865 - +3.2
932,954 - +5.2
933,029 + +6.7
933,126 + +4.8
933,134 - +4.7
933,134 - +4.5
933,134 - +3.5
933,134 - +5.0
933,134 - +4.7
933,142 - +4.5
933,152 + +4.6
933,189 - +5.1
933,321 - B158DRAFT_0909 0.22 +4.3
933,368 + B158DRAFT_0909 0.27 +4.4
933,381 + B158DRAFT_0909 0.28 +5.7
933,389 - B158DRAFT_0909 0.29 +4.7
933,389 - B158DRAFT_0909 0.29 +5.2
933,389 - B158DRAFT_0909 0.29 +5.4
933,389 - B158DRAFT_0909 0.29 +6.2
933,460 - B158DRAFT_0909 0.37 +5.5
933,571 + B158DRAFT_0909 0.49 +4.7
933,665 + B158DRAFT_0909 0.60 +3.9
933,673 - B158DRAFT_0909 0.61 +6.7
933,737 + B158DRAFT_0909 0.68 +5.1
933,752 - B158DRAFT_0909 0.69 +3.9
933,775 + B158DRAFT_0909 0.72 +4.8
933,775 + B158DRAFT_0909 0.72 +6.3
933,822 + B158DRAFT_0909 0.77 +4.8
933,822 + B158DRAFT_0909 0.77 +5.7
933,822 + B158DRAFT_0909 0.77 +4.9
933,822 + B158DRAFT_0909 0.77 +5.1
933,822 + B158DRAFT_0909 0.77 +4.1
933,822 + B158DRAFT_0909 0.77 +3.1
933,825 - B158DRAFT_0909 0.77 +5.4
933,830 + B158DRAFT_0909 0.78 +5.2
933,830 - B158DRAFT_0909 0.78 +5.4
933,830 - B158DRAFT_0909 0.78 +4.4
933,830 - B158DRAFT_0909 0.78 +4.3
933,830 - B158DRAFT_0909 0.78 +5.3
933,944 + +5.1
933,953 + +5.6
934,062 - -0.8
934,122 + -1.8
934,172 - -0.5
934,172 - +2.3
934,193 + -0.7
934,193 + -2.1
934,278 + B158DRAFT_0910 0.14 +0.7
934,291 - B158DRAFT_0910 0.15 -0.1
934,293 + B158DRAFT_0910 0.16 +0.8
934,293 + B158DRAFT_0910 0.16 -0.8
934,301 - B158DRAFT_0910 0.16 +0.4
934,301 - B158DRAFT_0910 0.16 -1.7
934,301 - B158DRAFT_0910 0.16 -1.2
934,301 - B158DRAFT_0910 0.16 -0.2
934,301 - B158DRAFT_0910 0.16 -3.0
934,301 - B158DRAFT_0910 0.16 -1.1
934,317 - B158DRAFT_0910 0.17 -0.7
934,319 + B158DRAFT_0910 0.18 -1.0
934,319 + B158DRAFT_0910 0.18 -0.1
934,319 + B158DRAFT_0910 0.18 -1.1
934,319 + B158DRAFT_0910 0.18 -0.4
934,319 + B158DRAFT_0910 0.18 +0.3
934,319 + B158DRAFT_0910 0.18 -0.5
934,319 + B158DRAFT_0910 0.18 -0.7
934,319 + B158DRAFT_0910 0.18 -0.5
934,319 + B158DRAFT_0910 0.18 +1.5
934,319 + B158DRAFT_0910 0.18 +1.5
934,319 + B158DRAFT_0910 0.18 -1.9
934,319 + B158DRAFT_0910 0.18 -0.9
934,319 + B158DRAFT_0910 0.18 -0.4
934,319 + B158DRAFT_0910 0.18 -0.6
934,319 + B158DRAFT_0910 0.18 -0.8
934,319 + B158DRAFT_0910 0.18 -0.3
934,327 - B158DRAFT_0910 0.18 +0.4
934,327 - B158DRAFT_0910 0.18 -2.7
934,327 - B158DRAFT_0910 0.18 +0.4
934,327 - B158DRAFT_0910 0.18 -0.3
934,327 - B158DRAFT_0910 0.18 -1.7
934,327 - B158DRAFT_0910 0.18 -0.4
934,327 - B158DRAFT_0910 0.18 +0.1
934,327 - B158DRAFT_0910 0.18 -1.4
934,327 - B158DRAFT_0910 0.18 -1.4
934,327 - B158DRAFT_0910 0.18 -0.1
934,341 - B158DRAFT_0910 0.19 -1.5
934,346 - B158DRAFT_0910 0.20 -0.8
934,346 - B158DRAFT_0910 0.20 -0.7
934,395 + B158DRAFT_0910 0.23 -1.5
934,435 + B158DRAFT_0910 0.27 -1.7
934,468 + B158DRAFT_0910 0.29 +0.3
934,471 - B158DRAFT_0910 0.29 -0.6
934,528 - B158DRAFT_0910 0.34 -0.1
934,550 + B158DRAFT_0910 0.36 -2.2
934,563 - B158DRAFT_0910 0.37 -0.3
934,565 - B158DRAFT_0910 0.37 -1.0
934,577 + B158DRAFT_0910 0.38 -0.4
934,579 + B158DRAFT_0910 0.38 -1.1
934,579 + B158DRAFT_0910 0.38 -2.1
934,579 + B158DRAFT_0910 0.38 +1.2
934,579 + B158DRAFT_0910 0.38 +1.0
934,587 - B158DRAFT_0910 0.38 -0.7
934,587 - B158DRAFT_0910 0.38 -0.4
934,587 - B158DRAFT_0910 0.38 -1.5
934,587 - B158DRAFT_0910 0.38 -0.3
934,625 + B158DRAFT_0910 0.41 -0.9
934,625 + B158DRAFT_0910 0.41 +1.3
934,633 - B158DRAFT_0910 0.42 -0.6
934,633 - B158DRAFT_0910 0.42 -0.1
934,633 - B158DRAFT_0910 0.42 +0.2
934,633 - B158DRAFT_0910 0.42 +0.9
934,633 - B158DRAFT_0910 0.42 -1.7
934,711 - B158DRAFT_0910 0.48 -0.9
934,724 - B158DRAFT_0910 0.49 -1.6
934,742 - B158DRAFT_0910 0.50 +0.2
934,795 - B158DRAFT_0910 0.54 +1.9
934,802 + B158DRAFT_0910 0.55 -0.3
934,802 + B158DRAFT_0910 0.55 -1.2
934,810 - B158DRAFT_0910 0.56 -1.2
934,826 + B158DRAFT_0910 0.57 +0.5
934,827 + B158DRAFT_0910 0.57 -2.3
934,850 + B158DRAFT_0910 0.59 -0.7
934,851 + B158DRAFT_0910 0.59 +0.6
934,851 + B158DRAFT_0910 0.59 -2.5
934,852 + B158DRAFT_0910 0.59 -0.6
934,852 + B158DRAFT_0910 0.59 -0.5
934,942 + B158DRAFT_0910 0.66 +2.3
934,949 + B158DRAFT_0910 0.66 -0.6
934,950 - B158DRAFT_0910 0.67 -0.6
934,975 + B158DRAFT_0910 0.68 -1.0
934,975 + B158DRAFT_0910 0.68 -0.3
934,983 - B158DRAFT_0910 0.69 -0.2
934,983 - B158DRAFT_0910 0.69 -2.0
934,983 - B158DRAFT_0910 0.69 +0.0

Or see this region's nucleotide sequence