Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0825 and B158DRAFT_0826 are separated by 317 nucleotides B158DRAFT_0826 and B158DRAFT_0827 overlap by 14 nucleotides B158DRAFT_0827 and B158DRAFT_0828 are separated by 254 nucleotides
B158DRAFT_0825: B158DRAFT_0825 - Periplasmic protease, at 836,355 to 837,632
_0825
B158DRAFT_0826: B158DRAFT_0826 - drug resistance transporter, Bcr/CflA subfamily, at 837,950 to 839,134
_0826
B158DRAFT_0827: B158DRAFT_0827 - acyl-phosphate glycerol 3-phosphate acyltransferase, at 839,121 to 839,726
_0827
B158DRAFT_0828: B158DRAFT_0828 - dihydroneopterin aldolase, at 839,981 to 840,334
_0828
Position (kb) 837
838
839
840 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 836.952 kb on - strand, within B158DRAFT_0825 at 836.981 kb on + strand, within B158DRAFT_0825 at 836.981 kb on + strand, within B158DRAFT_0825 at 837.067 kb on - strand, within B158DRAFT_0825 at 837.077 kb on - strand, within B158DRAFT_0825 at 837.085 kb on + strand, within B158DRAFT_0825 at 837.085 kb on + strand, within B158DRAFT_0825 at 837.093 kb on - strand, within B158DRAFT_0825 at 837.095 kb on + strand, within B158DRAFT_0825 at 837.111 kb on - strand, within B158DRAFT_0825 at 837.111 kb on - strand, within B158DRAFT_0825 at 837.226 kb on - strand, within B158DRAFT_0825 at 837.226 kb on - strand, within B158DRAFT_0825 at 837.283 kb on + strand, within B158DRAFT_0825 at 837.411 kb on - strand, within B158DRAFT_0825 at 837.437 kb on - strand, within B158DRAFT_0825 at 837.521 kb on - strand at 837.525 kb on + strand at 837.564 kb on - strand at 837.569 kb on - strand at 837.585 kb on + strand at 837.585 kb on + strand at 837.585 kb on + strand at 837.593 kb on - strand at 837.593 kb on - strand at 837.643 kb on - strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.958 kb on + strand at 837.959 kb on + strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.966 kb on - strand at 837.967 kb on - strand at 837.967 kb on - strand at 837.980 kb on + strand at 838.013 kb on + strand at 838.013 kb on - strand at 838.021 kb on - strand at 838.179 kb on + strand, within B158DRAFT_0826 at 838.199 kb on + strand, within B158DRAFT_0826 at 838.205 kb on + strand, within B158DRAFT_0826 at 838.213 kb on - strand, within B158DRAFT_0826 at 838.223 kb on - strand, within B158DRAFT_0826 at 838.232 kb on + strand, within B158DRAFT_0826 at 838.240 kb on - strand, within B158DRAFT_0826 at 838.249 kb on + strand, within B158DRAFT_0826 at 838.249 kb on + strand, within B158DRAFT_0826 at 838.249 kb on + strand, within B158DRAFT_0826 at 838.249 kb on + strand, within B158DRAFT_0826 at 838.257 kb on - strand, within B158DRAFT_0826 at 838.257 kb on - strand, within B158DRAFT_0826 at 838.257 kb on - strand, within B158DRAFT_0826 at 838.257 kb on - strand, within B158DRAFT_0826 at 838.263 kb on - strand, within B158DRAFT_0826 at 838.464 kb on - strand, within B158DRAFT_0826 at 838.466 kb on + strand, within B158DRAFT_0826 at 838.479 kb on - strand, within B158DRAFT_0826 at 838.493 kb on + strand, within B158DRAFT_0826 at 838.501 kb on - strand, within B158DRAFT_0826 at 838.509 kb on + strand, within B158DRAFT_0826 at 838.558 kb on - strand, within B158DRAFT_0826 at 838.661 kb on + strand, within B158DRAFT_0826 at 838.727 kb on + strand, within B158DRAFT_0826 at 838.727 kb on + strand, within B158DRAFT_0826 at 838.727 kb on + strand, within B158DRAFT_0826 at 838.730 kb on - strand, within B158DRAFT_0826 at 838.733 kb on + strand, within B158DRAFT_0826 at 838.735 kb on - strand, within B158DRAFT_0826 at 838.735 kb on - strand, within B158DRAFT_0826 at 838.735 kb on - strand, within B158DRAFT_0826 at 838.741 kb on - strand, within B158DRAFT_0826 at 838.760 kb on - strand, within B158DRAFT_0826 at 838.799 kb on + strand, within B158DRAFT_0826 at 838.799 kb on + strand, within B158DRAFT_0826 at 838.807 kb on - strand, within B158DRAFT_0826 at 838.813 kb on + strand, within B158DRAFT_0826 at 838.813 kb on + strand, within B158DRAFT_0826 at 838.857 kb on - strand, within B158DRAFT_0826 at 838.913 kb on - strand, within B158DRAFT_0826 at 838.913 kb on - strand, within B158DRAFT_0826 at 839.000 kb on + strand, within B158DRAFT_0826 at 839.000 kb on + strand, within B158DRAFT_0826 at 839.005 kb on + strand, within B158DRAFT_0826 at 839.005 kb on + strand, within B158DRAFT_0826 at 839.005 kb on + strand, within B158DRAFT_0826 at 839.005 kb on + strand, within B158DRAFT_0826 at 839.013 kb on - strand, within B158DRAFT_0826 at 839.020 kb on + strand at 839.020 kb on + strand at 839.028 kb on - strand at 839.043 kb on + strand at 839.043 kb on + strand at 839.043 kb on + strand at 839.051 kb on - strand at 839.060 kb on + strand at 839.076 kb on - strand at 839.076 kb on - strand at 839.087 kb on + strand at 839.088 kb on - strand at 839.299 kb on - strand, within B158DRAFT_0827 at 839.334 kb on - strand, within B158DRAFT_0827 at 839.356 kb on + strand, within B158DRAFT_0827 at 839.383 kb on - strand, within B158DRAFT_0827 at 839.408 kb on - strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.445 kb on - strand, within B158DRAFT_0827 at 839.445 kb on - strand, within B158DRAFT_0827 at 839.445 kb on - strand, within B158DRAFT_0827 at 839.445 kb on - strand, within B158DRAFT_0827 at 839.499 kb on - strand, within B158DRAFT_0827 at 839.560 kb on - strand, within B158DRAFT_0827 at 839.586 kb on + strand, within B158DRAFT_0827 at 839.608 kb on - strand, within B158DRAFT_0827 at 839.608 kb on - strand, within B158DRAFT_0827 at 839.686 kb on + strand at 839.686 kb on + strand at 839.694 kb on - strand at 839.733 kb on + strand at 839.733 kb on + strand at 839.733 kb on + strand at 839.740 kb on - strand at 839.741 kb on - strand at 839.767 kb on - strand at 839.769 kb on + strand at 839.777 kb on - strand at 839.781 kb on - strand at 839.781 kb on - strand at 839.792 kb on - strand at 839.812 kb on + strand at 839.885 kb on + strand at 839.885 kb on + strand at 839.938 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 836,952 - B158DRAFT_0825 0.47 -1.4 836,981 + B158DRAFT_0825 0.49 -0.4 836,981 + B158DRAFT_0825 0.49 -1.1 837,067 - B158DRAFT_0825 0.56 +1.7 837,077 - B158DRAFT_0825 0.56 -1.7 837,085 + B158DRAFT_0825 0.57 +0.1 837,085 + B158DRAFT_0825 0.57 +0.8 837,093 - B158DRAFT_0825 0.58 -0.3 837,095 + B158DRAFT_0825 0.58 -1.6 837,111 - B158DRAFT_0825 0.59 -0.8 837,111 - B158DRAFT_0825 0.59 -0.8 837,226 - B158DRAFT_0825 0.68 +0.4 837,226 - B158DRAFT_0825 0.68 -0.6 837,283 + B158DRAFT_0825 0.73 -0.1 837,411 - B158DRAFT_0825 0.83 -1.2 837,437 - B158DRAFT_0825 0.85 -2.0 837,521 - -0.2 837,525 + -1.5 837,564 - +0.6 837,569 - -0.8 837,585 + -0.9 837,585 + -0.2 837,585 + +1.4 837,593 - -0.0 837,593 - +1.0 837,643 - -0.5 837,958 + +0.8 837,958 + -1.1 837,958 + -0.4 837,958 + -0.4 837,958 + -1.0 837,958 + -1.0 837,958 + +2.2 837,958 + +0.3 837,958 + -0.4 837,958 + -1.0 837,958 + -3.0 837,958 + -2.0 837,958 + -1.0 837,958 + -1.0 837,958 + -0.2 837,958 + -2.9 837,958 + -0.6 837,958 + -0.7 837,958 + -1.6 837,958 + -0.6 837,958 + -0.5 837,958 + -0.5 837,958 + +0.8 837,958 + +1.3 837,958 + -1.4 837,958 + -0.5 837,958 + -0.1 837,958 + +4.1 837,958 + -1.7 837,958 + -1.9 837,958 + -1.1 837,959 + -1.3 837,966 - +0.4 837,966 - -0.1 837,966 - +2.8 837,966 - -0.6 837,966 - +0.3 837,966 - -0.9 837,966 - -0.7 837,966 - -0.7 837,966 - -0.4 837,966 - +0.1 837,966 - +2.5 837,966 - -0.2 837,966 - +0.2 837,966 - +1.1 837,966 - -1.3 837,966 - -0.4 837,966 - -0.1 837,966 - +1.8 837,966 - +1.1 837,966 - -0.4 837,966 - -0.8 837,966 - +1.1 837,966 - -0.9 837,966 - -0.6 837,966 - -1.3 837,966 - +1.9 837,966 - -0.8 837,966 - -0.4 837,966 - -0.5 837,966 - -1.4 837,967 - -0.3 837,967 - -0.9 837,980 + -0.6 838,013 + -1.0 838,013 - -0.6 838,021 - +1.0 838,179 + B158DRAFT_0826 0.19 -1.2 838,199 + B158DRAFT_0826 0.21 -0.0 838,205 + B158DRAFT_0826 0.22 -0.9 838,213 - B158DRAFT_0826 0.22 -2.2 838,223 - B158DRAFT_0826 0.23 -0.5 838,232 + B158DRAFT_0826 0.24 +2.1 838,240 - B158DRAFT_0826 0.24 +1.2 838,249 + B158DRAFT_0826 0.25 +0.4 838,249 + B158DRAFT_0826 0.25 -1.3 838,249 + B158DRAFT_0826 0.25 -0.2 838,249 + B158DRAFT_0826 0.25 -1.7 838,257 - B158DRAFT_0826 0.26 -0.3 838,257 - B158DRAFT_0826 0.26 -0.2 838,257 - B158DRAFT_0826 0.26 -0.6 838,257 - B158DRAFT_0826 0.26 -0.8 838,263 - B158DRAFT_0826 0.26 -0.8 838,464 - B158DRAFT_0826 0.43 -0.1 838,466 + B158DRAFT_0826 0.44 -0.6 838,479 - B158DRAFT_0826 0.45 +1.4 838,493 + B158DRAFT_0826 0.46 -0.2 838,501 - B158DRAFT_0826 0.46 -0.3 838,509 + B158DRAFT_0826 0.47 +0.3 838,558 - B158DRAFT_0826 0.51 -1.8 838,661 + B158DRAFT_0826 0.60 -1.9 838,727 + B158DRAFT_0826 0.66 -0.6 838,727 + B158DRAFT_0826 0.66 +0.9 838,727 + B158DRAFT_0826 0.66 +0.3 838,730 - B158DRAFT_0826 0.66 +0.5 838,733 + B158DRAFT_0826 0.66 -0.6 838,735 - B158DRAFT_0826 0.66 -0.8 838,735 - B158DRAFT_0826 0.66 +0.5 838,735 - B158DRAFT_0826 0.66 -0.9 838,741 - B158DRAFT_0826 0.67 -0.5 838,760 - B158DRAFT_0826 0.68 +0.1 838,799 + B158DRAFT_0826 0.72 +0.3 838,799 + B158DRAFT_0826 0.72 +0.0 838,807 - B158DRAFT_0826 0.72 +2.4 838,813 + B158DRAFT_0826 0.73 -1.4 838,813 + B158DRAFT_0826 0.73 -1.5 838,857 - B158DRAFT_0826 0.77 -1.0 838,913 - B158DRAFT_0826 0.81 -1.1 838,913 - B158DRAFT_0826 0.81 +0.4 839,000 + B158DRAFT_0826 0.89 -0.7 839,000 + B158DRAFT_0826 0.89 +0.6 839,005 + B158DRAFT_0826 0.89 -0.5 839,005 + B158DRAFT_0826 0.89 -0.8 839,005 + B158DRAFT_0826 0.89 -0.3 839,005 + B158DRAFT_0826 0.89 +1.4 839,013 - B158DRAFT_0826 0.90 -1.8 839,020 + -0.1 839,020 + +0.4 839,028 - -1.9 839,043 + +1.9 839,043 + -1.5 839,043 + +1.6 839,051 - -0.7 839,060 + -0.5 839,076 - -0.5 839,076 - -1.1 839,087 + +0.3 839,088 - +0.0 839,299 - B158DRAFT_0827 0.29 -1.2 839,334 - B158DRAFT_0827 0.35 +2.8 839,356 + B158DRAFT_0827 0.39 +0.5 839,383 - B158DRAFT_0827 0.43 -0.1 839,408 - B158DRAFT_0827 0.47 +0.0 839,437 + B158DRAFT_0827 0.52 +2.0 839,437 + B158DRAFT_0827 0.52 -0.3 839,437 + B158DRAFT_0827 0.52 -2.1 839,437 + B158DRAFT_0827 0.52 +0.5 839,437 + B158DRAFT_0827 0.52 +0.3 839,445 - B158DRAFT_0827 0.53 +3.4 839,445 - B158DRAFT_0827 0.53 -1.2 839,445 - B158DRAFT_0827 0.53 -1.9 839,445 - B158DRAFT_0827 0.53 -2.0 839,499 - B158DRAFT_0827 0.62 -1.5 839,560 - B158DRAFT_0827 0.72 -2.8 839,586 + B158DRAFT_0827 0.77 -0.8 839,608 - B158DRAFT_0827 0.80 +1.5 839,608 - B158DRAFT_0827 0.80 -1.4 839,686 + -1.2 839,686 + -1.4 839,694 - +1.2 839,733 + -0.7 839,733 + -1.4 839,733 + -2.2 839,740 - -0.3 839,741 - -0.8 839,767 - -2.1 839,769 + +0.5 839,777 - -1.6 839,781 - +0.1 839,781 - -0.3 839,792 - -1.5 839,812 + -0.7 839,885 + +0.1 839,885 + +0.4 839,938 + -0.1
Or see this region's nucleotide sequence