Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0799

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0798 and B158DRAFT_0799 are separated by 259 nucleotidesB158DRAFT_0799 and B158DRAFT_0800 are separated by 35 nucleotides B158DRAFT_0798: B158DRAFT_0798 - phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio type, at 801,788 to 802,894 _0798 B158DRAFT_0799: B158DRAFT_0799 - aconitate hydratase 1, at 803,154 to 805,859 _0799 B158DRAFT_0800: B158DRAFT_0800 - Major Facilitator Superfamily., at 805,895 to 807,262 _0800 Position (kb) 803 804 805 806Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 802.972 kb on + strandat 803.018 kb on - strandat 803.028 kb on - strandat 803.038 kb on + strandat 803.046 kb on - strandat 803.086 kb on + strandat 803.104 kb on - strandat 803.106 kb on + strandat 803.181 kb on - strandat 803.194 kb on - strandat 803.237 kb on - strandat 803.244 kb on + strandat 803.244 kb on + strandat 803.244 kb on + strandat 803.298 kb on + strandat 803.300 kb on + strandat 803.313 kb on + strandat 803.314 kb on + strandat 803.321 kb on - strandat 803.328 kb on + strandat 803.344 kb on - strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.517 kb on + strand, within B158DRAFT_0799at 803.546 kb on - strand, within B158DRAFT_0799at 803.600 kb on + strand, within B158DRAFT_0799at 803.624 kb on + strand, within B158DRAFT_0799at 803.654 kb on + strand, within B158DRAFT_0799at 803.662 kb on - strand, within B158DRAFT_0799at 803.706 kb on - strand, within B158DRAFT_0799at 803.720 kb on - strand, within B158DRAFT_0799at 803.759 kb on + strand, within B158DRAFT_0799at 803.764 kb on + strand, within B158DRAFT_0799at 803.764 kb on + strand, within B158DRAFT_0799at 803.772 kb on - strand, within B158DRAFT_0799at 803.772 kb on - strand, within B158DRAFT_0799at 803.772 kb on - strand, within B158DRAFT_0799at 803.794 kb on + strand, within B158DRAFT_0799at 803.802 kb on - strand, within B158DRAFT_0799at 803.809 kb on + strand, within B158DRAFT_0799at 803.824 kb on + strand, within B158DRAFT_0799at 803.873 kb on + strand, within B158DRAFT_0799at 803.887 kb on + strand, within B158DRAFT_0799at 803.887 kb on + strand, within B158DRAFT_0799at 803.895 kb on - strand, within B158DRAFT_0799at 803.937 kb on + strand, within B158DRAFT_0799at 803.937 kb on + strand, within B158DRAFT_0799at 803.940 kb on - strand, within B158DRAFT_0799at 803.950 kb on - strand, within B158DRAFT_0799at 804.002 kb on - strand, within B158DRAFT_0799at 804.006 kb on + strand, within B158DRAFT_0799at 804.006 kb on + strand, within B158DRAFT_0799at 804.006 kb on + strand, within B158DRAFT_0799at 804.006 kb on + strand, within B158DRAFT_0799at 804.017 kb on + strand, within B158DRAFT_0799at 804.024 kb on - strand, within B158DRAFT_0799at 804.024 kb on - strand, within B158DRAFT_0799at 804.032 kb on - strand, within B158DRAFT_0799at 804.077 kb on + strand, within B158DRAFT_0799at 804.085 kb on - strand, within B158DRAFT_0799at 804.198 kb on + strand, within B158DRAFT_0799at 804.215 kb on - strand, within B158DRAFT_0799at 804.225 kb on - strand, within B158DRAFT_0799at 804.225 kb on - strand, within B158DRAFT_0799at 804.231 kb on + strand, within B158DRAFT_0799at 804.239 kb on - strand, within B158DRAFT_0799at 804.241 kb on + strand, within B158DRAFT_0799at 804.261 kb on + strand, within B158DRAFT_0799at 804.314 kb on - strand, within B158DRAFT_0799at 804.314 kb on - strand, within B158DRAFT_0799at 804.335 kb on - strand, within B158DRAFT_0799at 804.485 kb on - strand, within B158DRAFT_0799at 804.518 kb on - strand, within B158DRAFT_0799at 804.560 kb on + strand, within B158DRAFT_0799at 804.560 kb on + strand, within B158DRAFT_0799at 804.560 kb on + strand, within B158DRAFT_0799at 804.560 kb on + strand, within B158DRAFT_0799at 804.568 kb on - strand, within B158DRAFT_0799at 804.568 kb on - strand, within B158DRAFT_0799at 804.583 kb on + strand, within B158DRAFT_0799at 804.640 kb on + strand, within B158DRAFT_0799at 804.675 kb on - strand, within B158DRAFT_0799at 804.696 kb on - strand, within B158DRAFT_0799at 804.697 kb on - strand, within B158DRAFT_0799at 804.738 kb on + strand, within B158DRAFT_0799at 804.748 kb on + strand, within B158DRAFT_0799at 804.748 kb on + strand, within B158DRAFT_0799at 804.751 kb on - strand, within B158DRAFT_0799at 804.767 kb on + strand, within B158DRAFT_0799at 804.767 kb on + strand, within B158DRAFT_0799at 804.785 kb on + strand, within B158DRAFT_0799at 804.792 kb on - strand, within B158DRAFT_0799at 804.969 kb on + strand, within B158DRAFT_0799at 804.969 kb on + strand, within B158DRAFT_0799at 804.979 kb on - strand, within B158DRAFT_0799at 805.036 kb on + strand, within B158DRAFT_0799at 805.044 kb on - strand, within B158DRAFT_0799at 805.106 kb on - strand, within B158DRAFT_0799at 805.164 kb on + strand, within B158DRAFT_0799at 805.248 kb on - strand, within B158DRAFT_0799at 805.253 kb on + strand, within B158DRAFT_0799at 805.253 kb on + strand, within B158DRAFT_0799at 805.253 kb on + strand, within B158DRAFT_0799at 805.261 kb on - strand, within B158DRAFT_0799at 805.277 kb on + strand, within B158DRAFT_0799at 805.285 kb on - strand, within B158DRAFT_0799at 805.285 kb on - strand, within B158DRAFT_0799at 805.285 kb on - strand, within B158DRAFT_0799at 805.296 kb on + strand, within B158DRAFT_0799at 805.320 kb on - strand, within B158DRAFT_0799at 805.325 kb on + strand, within B158DRAFT_0799at 805.408 kb on - strand, within B158DRAFT_0799at 805.455 kb on - strand, within B158DRAFT_0799at 805.463 kb on - strand, within B158DRAFT_0799at 805.564 kb on + strand, within B158DRAFT_0799at 805.564 kb on + strand, within B158DRAFT_0799at 805.599 kb on - strandat 805.613 kb on + strandat 805.651 kb on - strandat 805.776 kb on - strandat 805.853 kb on + strandat 805.971 kb on + strandat 805.971 kb on + strandat 805.979 kb on - strandat 806.047 kb on - strand, within B158DRAFT_0800at 806.102 kb on - strand, within B158DRAFT_0800at 806.222 kb on + strand, within B158DRAFT_0800at 806.242 kb on + strand, within B158DRAFT_0800at 806.259 kb on + strand, within B158DRAFT_0800at 806.336 kb on + strand, within B158DRAFT_0800at 806.336 kb on + strand, within B158DRAFT_0800at 806.336 kb on + strand, within B158DRAFT_0800at 806.336 kb on + strand, within B158DRAFT_0800at 806.355 kb on + strand, within B158DRAFT_0800at 806.355 kb on + strand, within B158DRAFT_0800at 806.363 kb on + strand, within B158DRAFT_0800at 806.374 kb on + strand, within B158DRAFT_0800at 806.382 kb on - strand, within B158DRAFT_0800at 806.387 kb on - strand, within B158DRAFT_0800at 806.439 kb on + strand, within B158DRAFT_0800at 806.439 kb on + strand, within B158DRAFT_0800at 806.444 kb on + strand, within B158DRAFT_0800at 806.447 kb on - strand, within B158DRAFT_0800at 806.447 kb on - strand, within B158DRAFT_0800at 806.558 kb on + strand, within B158DRAFT_0800at 806.626 kb on - strand, within B158DRAFT_0800at 806.665 kb on + strand, within B158DRAFT_0800at 806.673 kb on - strand, within B158DRAFT_0800at 806.731 kb on - strand, within B158DRAFT_0800at 806.778 kb on + strand, within B158DRAFT_0800at 806.786 kb on - strand, within B158DRAFT_0800at 806.786 kb on - strand, within B158DRAFT_0800at 806.814 kb on + strand, within B158DRAFT_0800at 806.814 kb on + strand, within B158DRAFT_0800at 806.815 kb on + strand, within B158DRAFT_0800at 806.840 kb on + strand, within B158DRAFT_0800at 806.840 kb on + strand, within B158DRAFT_0800at 806.840 kb on + strand, within B158DRAFT_0800at 806.848 kb on - strand, within B158DRAFT_0800

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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802,972 + -1.6
803,018 - +0.4
803,028 - -0.2
803,038 + -0.9
803,046 - +0.2
803,086 + -1.2
803,104 - -1.1
803,106 + +0.6
803,181 - +0.6
803,194 - +0.0
803,237 - -1.1
803,244 + -1.1
803,244 + -1.1
803,244 + -0.4
803,298 + +4.1
803,300 + -2.4
803,313 + +0.8
803,314 + -1.2
803,321 - -1.5
803,328 + -0.9
803,344 - +2.3
803,387 + -0.4
803,387 + -0.6
803,387 + -2.2
803,387 + -1.5
803,387 + +0.5
803,387 + -0.8
803,387 + -2.1
803,395 - -0.1
803,395 - +0.1
803,395 - -0.7
803,395 - -0.1
803,395 - -1.5
803,395 - -0.9
803,517 + B158DRAFT_0799 0.13 +0.9
803,546 - B158DRAFT_0799 0.14 -0.2
803,600 + B158DRAFT_0799 0.16 -0.6
803,624 + B158DRAFT_0799 0.17 -2.4
803,654 + B158DRAFT_0799 0.18 -0.3
803,662 - B158DRAFT_0799 0.19 +3.1
803,706 - B158DRAFT_0799 0.20 -0.5
803,720 - B158DRAFT_0799 0.21 -0.7
803,759 + B158DRAFT_0799 0.22 -0.1
803,764 + B158DRAFT_0799 0.23 -0.1
803,764 + B158DRAFT_0799 0.23 -2.6
803,772 - B158DRAFT_0799 0.23 -1.2
803,772 - B158DRAFT_0799 0.23 -0.1
803,772 - B158DRAFT_0799 0.23 -1.3
803,794 + B158DRAFT_0799 0.24 -0.0
803,802 - B158DRAFT_0799 0.24 -1.2
803,809 + B158DRAFT_0799 0.24 -0.4
803,824 + B158DRAFT_0799 0.25 +0.8
803,873 + B158DRAFT_0799 0.27 -0.5
803,887 + B158DRAFT_0799 0.27 -1.4
803,887 + B158DRAFT_0799 0.27 -0.9
803,895 - B158DRAFT_0799 0.27 -1.4
803,937 + B158DRAFT_0799 0.29 +1.5
803,937 + B158DRAFT_0799 0.29 +0.3
803,940 - B158DRAFT_0799 0.29 -1.5
803,950 - B158DRAFT_0799 0.29 -0.6
804,002 - B158DRAFT_0799 0.31 -1.3
804,006 + B158DRAFT_0799 0.31 -2.0
804,006 + B158DRAFT_0799 0.31 +0.3
804,006 + B158DRAFT_0799 0.31 -1.4
804,006 + B158DRAFT_0799 0.31 -0.4
804,017 + B158DRAFT_0799 0.32 +0.1
804,024 - B158DRAFT_0799 0.32 +4.4
804,024 - B158DRAFT_0799 0.32 -1.0
804,032 - B158DRAFT_0799 0.32 -0.3
804,077 + B158DRAFT_0799 0.34 -1.1
804,085 - B158DRAFT_0799 0.34 -1.9
804,198 + B158DRAFT_0799 0.39 +0.1
804,215 - B158DRAFT_0799 0.39 -1.6
804,225 - B158DRAFT_0799 0.40 -1.1
804,225 - B158DRAFT_0799 0.40 -1.0
804,231 + B158DRAFT_0799 0.40 +3.1
804,239 - B158DRAFT_0799 0.40 -0.3
804,241 + B158DRAFT_0799 0.40 -0.9
804,261 + B158DRAFT_0799 0.41 +0.2
804,314 - B158DRAFT_0799 0.43 -0.3
804,314 - B158DRAFT_0799 0.43 -1.0
804,335 - B158DRAFT_0799 0.44 +0.2
804,485 - B158DRAFT_0799 0.49 -0.3
804,518 - B158DRAFT_0799 0.50 -1.1
804,560 + B158DRAFT_0799 0.52 +3.2
804,560 + B158DRAFT_0799 0.52 -0.4
804,560 + B158DRAFT_0799 0.52 +1.0
804,560 + B158DRAFT_0799 0.52 -0.5
804,568 - B158DRAFT_0799 0.52 +1.5
804,568 - B158DRAFT_0799 0.52 -0.9
804,583 + B158DRAFT_0799 0.53 +0.6
804,640 + B158DRAFT_0799 0.55 -0.1
804,675 - B158DRAFT_0799 0.56 -0.8
804,696 - B158DRAFT_0799 0.57 -0.7
804,697 - B158DRAFT_0799 0.57 +0.9
804,738 + B158DRAFT_0799 0.59 -0.6
804,748 + B158DRAFT_0799 0.59 +0.8
804,748 + B158DRAFT_0799 0.59 +0.8
804,751 - B158DRAFT_0799 0.59 -0.3
804,767 + B158DRAFT_0799 0.60 +0.7
804,767 + B158DRAFT_0799 0.60 -1.2
804,785 + B158DRAFT_0799 0.60 +0.5
804,792 - B158DRAFT_0799 0.61 -2.9
804,969 + B158DRAFT_0799 0.67 -1.1
804,969 + B158DRAFT_0799 0.67 -0.9
804,979 - B158DRAFT_0799 0.67 -2.3
805,036 + B158DRAFT_0799 0.70 -0.5
805,044 - B158DRAFT_0799 0.70 -2.1
805,106 - B158DRAFT_0799 0.72 -1.3
805,164 + B158DRAFT_0799 0.74 +0.2
805,248 - B158DRAFT_0799 0.77 -2.2
805,253 + B158DRAFT_0799 0.78 -0.0
805,253 + B158DRAFT_0799 0.78 +0.9
805,253 + B158DRAFT_0799 0.78 -0.5
805,261 - B158DRAFT_0799 0.78 -2.9
805,277 + B158DRAFT_0799 0.78 -0.3
805,285 - B158DRAFT_0799 0.79 -0.3
805,285 - B158DRAFT_0799 0.79 -1.3
805,285 - B158DRAFT_0799 0.79 -0.3
805,296 + B158DRAFT_0799 0.79 -1.5
805,320 - B158DRAFT_0799 0.80 -0.2
805,325 + B158DRAFT_0799 0.80 +0.0
805,408 - B158DRAFT_0799 0.83 -0.6
805,455 - B158DRAFT_0799 0.85 +0.8
805,463 - B158DRAFT_0799 0.85 +0.6
805,564 + B158DRAFT_0799 0.89 +0.3
805,564 + B158DRAFT_0799 0.89 +0.2
805,599 - -0.6
805,613 + -0.4
805,651 - -0.5
805,776 - -0.4
805,853 + -2.1
805,971 + -0.8
805,971 + -1.7
805,979 - -0.3
806,047 - B158DRAFT_0800 0.11 -1.1
806,102 - B158DRAFT_0800 0.15 -1.1
806,222 + B158DRAFT_0800 0.24 -1.3
806,242 + B158DRAFT_0800 0.25 -1.0
806,259 + B158DRAFT_0800 0.27 -1.4
806,336 + B158DRAFT_0800 0.32 -1.1
806,336 + B158DRAFT_0800 0.32 -0.1
806,336 + B158DRAFT_0800 0.32 -0.8
806,336 + B158DRAFT_0800 0.32 +0.8
806,355 + B158DRAFT_0800 0.34 +0.9
806,355 + B158DRAFT_0800 0.34 +0.6
806,363 + B158DRAFT_0800 0.34 -0.0
806,374 + B158DRAFT_0800 0.35 -1.4
806,382 - B158DRAFT_0800 0.36 -1.3
806,387 - B158DRAFT_0800 0.36 +0.9
806,439 + B158DRAFT_0800 0.40 -2.8
806,439 + B158DRAFT_0800 0.40 -0.3
806,444 + B158DRAFT_0800 0.40 -2.7
806,447 - B158DRAFT_0800 0.40 +0.6
806,447 - B158DRAFT_0800 0.40 +0.2
806,558 + B158DRAFT_0800 0.48 -1.2
806,626 - B158DRAFT_0800 0.53 -0.6
806,665 + B158DRAFT_0800 0.56 -1.0
806,673 - B158DRAFT_0800 0.57 -0.5
806,731 - B158DRAFT_0800 0.61 +1.1
806,778 + B158DRAFT_0800 0.65 -0.4
806,786 - B158DRAFT_0800 0.65 -0.4
806,786 - B158DRAFT_0800 0.65 +0.5
806,814 + B158DRAFT_0800 0.67 +0.4
806,814 + B158DRAFT_0800 0.67 -1.4
806,815 + B158DRAFT_0800 0.67 -0.4
806,840 + B158DRAFT_0800 0.69 -0.1
806,840 + B158DRAFT_0800 0.69 -0.8
806,840 + B158DRAFT_0800 0.69 -2.1
806,848 - B158DRAFT_0800 0.70 -1.9

Or see this region's nucleotide sequence