Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0773

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0770 and B158DRAFT_0771 are separated by 44 nucleotidesB158DRAFT_0771 and B158DRAFT_0772 are separated by 105 nucleotidesB158DRAFT_0772 and B158DRAFT_0773 are separated by 59 nucleotidesB158DRAFT_0773 and B158DRAFT_0774 are separated by 106 nucleotidesB158DRAFT_0774 and B158DRAFT_0775 are separated by 39 nucleotidesB158DRAFT_0775 and B158DRAFT_0776 are separated by 32 nucleotides B158DRAFT_0770: B158DRAFT_0770 - Choline dehydrogenase and related flavoproteins, at 777,281 to 778,831 _0770 B158DRAFT_0771: B158DRAFT_0771 - Phosphopantetheine adenylyltransferase (EC 2.7.7.3), at 778,876 to 779,358 _0771 B158DRAFT_0772: B158DRAFT_0772 - Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I), at 779,464 to 779,724 _0772 B158DRAFT_0773: B158DRAFT_0773 - Predicted esterase of the alpha-beta hydrolase superfamily, at 779,784 to 780,548 _0773 B158DRAFT_0774: B158DRAFT_0774 - Predicted Fe-S-cluster oxidoreductase, at 780,655 to 781,032 _0774 B158DRAFT_0775: B158DRAFT_0775 - Protein of unknown function (DUF3301)., at 781,072 to 781,443 _0775 B158DRAFT_0776: B158DRAFT_0776 - outer membrane transport energization protein ExbD (TC 2.C.1.1.1), at 781,476 to 781,889 _0776 Position (kb) 779 780 781Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 778.811 kb on + strandat 779.362 kb on - strandat 779.387 kb on + strandat 779.395 kb on - strandat 779.395 kb on - strandat 779.720 kb on + strandat 779.720 kb on + strandat 779.720 kb on + strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.728 kb on - strandat 779.730 kb on + strandat 779.741 kb on + strandat 779.741 kb on + strandat 779.742 kb on + strandat 779.749 kb on - strandat 779.749 kb on - strandat 779.786 kb on + strandat 779.786 kb on + strandat 779.798 kb on + strandat 779.807 kb on + strandat 779.823 kb on + strandat 779.835 kb on + strandat 779.843 kb on - strandat 779.878 kb on - strand, within B158DRAFT_0773at 779.925 kb on + strand, within B158DRAFT_0773at 779.933 kb on - strand, within B158DRAFT_0773at 779.959 kb on + strand, within B158DRAFT_0773at 779.974 kb on + strand, within B158DRAFT_0773at 780.029 kb on + strand, within B158DRAFT_0773at 780.037 kb on - strand, within B158DRAFT_0773at 780.039 kb on + strand, within B158DRAFT_0773at 780.039 kb on + strand, within B158DRAFT_0773at 780.044 kb on + strand, within B158DRAFT_0773at 780.123 kb on + strand, within B158DRAFT_0773at 780.128 kb on + strand, within B158DRAFT_0773at 780.128 kb on + strand, within B158DRAFT_0773at 780.131 kb on - strand, within B158DRAFT_0773at 780.136 kb on - strand, within B158DRAFT_0773at 780.136 kb on - strand, within B158DRAFT_0773at 780.171 kb on - strand, within B158DRAFT_0773at 780.171 kb on - strand, within B158DRAFT_0773at 780.188 kb on + strand, within B158DRAFT_0773at 780.188 kb on + strand, within B158DRAFT_0773at 780.233 kb on + strand, within B158DRAFT_0773at 780.233 kb on + strand, within B158DRAFT_0773at 780.278 kb on + strand, within B158DRAFT_0773at 780.281 kb on - strand, within B158DRAFT_0773at 780.303 kb on - strand, within B158DRAFT_0773at 780.346 kb on + strand, within B158DRAFT_0773at 780.373 kb on - strand, within B158DRAFT_0773at 780.430 kb on + strand, within B158DRAFT_0773at 780.430 kb on + strand, within B158DRAFT_0773at 780.473 kb on - strandat 780.479 kb on + strandat 780.485 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.503 kb on + strandat 780.503 kb on + strandat 780.511 kb on - strandat 780.561 kb on + strandat 780.569 kb on - strandat 780.619 kb on + strandat 780.635 kb on - strandat 780.647 kb on + strandat 780.674 kb on - strandat 780.698 kb on + strand, within B158DRAFT_0774at 780.698 kb on + strand, within B158DRAFT_0774at 780.727 kb on + strand, within B158DRAFT_0774at 780.727 kb on + strand, within B158DRAFT_0774at 780.734 kb on - strand, within B158DRAFT_0774at 780.745 kb on + strand, within B158DRAFT_0774at 780.749 kb on - strand, within B158DRAFT_0774at 780.818 kb on + strand, within B158DRAFT_0774at 780.846 kb on + strand, within B158DRAFT_0774at 780.846 kb on + strand, within B158DRAFT_0774at 780.848 kb on - strand, within B158DRAFT_0774at 780.861 kb on + strand, within B158DRAFT_0774at 780.870 kb on - strand, within B158DRAFT_0774at 780.872 kb on + strand, within B158DRAFT_0774at 780.890 kb on + strand, within B158DRAFT_0774at 780.890 kb on + strand, within B158DRAFT_0774at 780.898 kb on - strand, within B158DRAFT_0774at 780.898 kb on - strand, within B158DRAFT_0774at 780.898 kb on - strand, within B158DRAFT_0774at 780.908 kb on + strand, within B158DRAFT_0774at 780.909 kb on + strand, within B158DRAFT_0774at 780.930 kb on + strand, within B158DRAFT_0774at 780.968 kb on + strand, within B158DRAFT_0774at 780.968 kb on + strand, within B158DRAFT_0774at 780.973 kb on + strand, within B158DRAFT_0774at 780.973 kb on + strand, within B158DRAFT_0774at 780.976 kb on - strand, within B158DRAFT_0774at 780.976 kb on - strand, within B158DRAFT_0774at 780.983 kb on + strand, within B158DRAFT_0774at 780.993 kb on + strand, within B158DRAFT_0774at 781.056 kb on + strandat 781.091 kb on - strandat 781.099 kb on - strandat 781.123 kb on - strand, within B158DRAFT_0775at 781.192 kb on - strand, within B158DRAFT_0775at 781.212 kb on - strand, within B158DRAFT_0775at 781.308 kb on + strand, within B158DRAFT_0775at 781.311 kb on - strand, within B158DRAFT_0775at 781.315 kb on + strand, within B158DRAFT_0775at 781.339 kb on + strand, within B158DRAFT_0775at 781.344 kb on + strand, within B158DRAFT_0775at 781.344 kb on + strand, within B158DRAFT_0775at 781.352 kb on - strand, within B158DRAFT_0775at 781.428 kb on + strandat 781.436 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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778,811 + -1.2
779,362 - -1.4
779,387 + +0.5
779,395 - -0.7
779,395 - -1.6
779,720 + +1.0
779,720 + +0.9
779,720 + -0.6
779,728 - -0.8
779,728 - -0.6
779,728 - -1.9
779,728 - -0.8
779,730 + -0.6
779,741 + +1.0
779,741 + +0.3
779,742 + -1.7
779,749 - +0.2
779,749 - -0.7
779,786 + -1.0
779,786 + -1.2
779,798 + -2.5
779,807 + +0.1
779,823 + -1.0
779,835 + -1.7
779,843 - -0.5
779,878 - B158DRAFT_0773 0.12 -1.1
779,925 + B158DRAFT_0773 0.18 +0.2
779,933 - B158DRAFT_0773 0.19 -0.1
779,959 + B158DRAFT_0773 0.23 -0.7
779,974 + B158DRAFT_0773 0.25 -0.2
780,029 + B158DRAFT_0773 0.32 -0.7
780,037 - B158DRAFT_0773 0.33 -1.8
780,039 + B158DRAFT_0773 0.33 -0.6
780,039 + B158DRAFT_0773 0.33 +0.9
780,044 + B158DRAFT_0773 0.34 -0.8
780,123 + B158DRAFT_0773 0.44 -1.6
780,128 + B158DRAFT_0773 0.45 -0.5
780,128 + B158DRAFT_0773 0.45 +0.9
780,131 - B158DRAFT_0773 0.45 -2.4
780,136 - B158DRAFT_0773 0.46 -2.0
780,136 - B158DRAFT_0773 0.46 -1.5
780,171 - B158DRAFT_0773 0.51 -0.0
780,171 - B158DRAFT_0773 0.51 -2.1
780,188 + B158DRAFT_0773 0.53 +0.3
780,188 + B158DRAFT_0773 0.53 -0.3
780,233 + B158DRAFT_0773 0.59 -0.4
780,233 + B158DRAFT_0773 0.59 -1.3
780,278 + B158DRAFT_0773 0.65 -1.1
780,281 - B158DRAFT_0773 0.65 +1.8
780,303 - B158DRAFT_0773 0.68 -0.1
780,346 + B158DRAFT_0773 0.73 -1.4
780,373 - B158DRAFT_0773 0.77 -2.5
780,430 + B158DRAFT_0773 0.84 -2.2
780,430 + B158DRAFT_0773 0.84 -1.1
780,473 - -1.4
780,479 + +2.2
780,485 - -1.2
780,497 - -3.0
780,497 - -0.9
780,497 - -0.8
780,497 - +1.5
780,497 - -0.6
780,503 + +0.4
780,503 + +0.6
780,511 - -1.7
780,561 + +1.3
780,569 - -0.7
780,619 + +0.5
780,635 - +0.3
780,647 + -1.2
780,674 - -0.3
780,698 + B158DRAFT_0774 0.11 -0.9
780,698 + B158DRAFT_0774 0.11 -0.5
780,727 + B158DRAFT_0774 0.19 -0.9
780,727 + B158DRAFT_0774 0.19 -0.0
780,734 - B158DRAFT_0774 0.21 -0.3
780,745 + B158DRAFT_0774 0.24 +0.1
780,749 - B158DRAFT_0774 0.25 -0.8
780,818 + B158DRAFT_0774 0.43 +2.3
780,846 + B158DRAFT_0774 0.51 -0.8
780,846 + B158DRAFT_0774 0.51 -1.0
780,848 - B158DRAFT_0774 0.51 -0.3
780,861 + B158DRAFT_0774 0.54 -0.4
780,870 - B158DRAFT_0774 0.57 -2.6
780,872 + B158DRAFT_0774 0.57 +0.8
780,890 + B158DRAFT_0774 0.62 +0.3
780,890 + B158DRAFT_0774 0.62 -1.2
780,898 - B158DRAFT_0774 0.64 -0.2
780,898 - B158DRAFT_0774 0.64 -1.7
780,898 - B158DRAFT_0774 0.64 -1.4
780,908 + B158DRAFT_0774 0.67 -1.0
780,909 + B158DRAFT_0774 0.67 -0.3
780,930 + B158DRAFT_0774 0.73 -0.8
780,968 + B158DRAFT_0774 0.83 -1.1
780,968 + B158DRAFT_0774 0.83 +0.5
780,973 + B158DRAFT_0774 0.84 -0.2
780,973 + B158DRAFT_0774 0.84 -0.3
780,976 - B158DRAFT_0774 0.85 -1.0
780,976 - B158DRAFT_0774 0.85 -2.1
780,983 + B158DRAFT_0774 0.87 -1.1
780,993 + B158DRAFT_0774 0.89 -1.1
781,056 + +0.2
781,091 - -1.5
781,099 - +2.7
781,123 - B158DRAFT_0775 0.14 -0.4
781,192 - B158DRAFT_0775 0.32 +0.3
781,212 - B158DRAFT_0775 0.38 +0.1
781,308 + B158DRAFT_0775 0.63 -1.5
781,311 - B158DRAFT_0775 0.64 +1.9
781,315 + B158DRAFT_0775 0.65 -1.7
781,339 + B158DRAFT_0775 0.72 -1.2
781,344 + B158DRAFT_0775 0.73 -0.9
781,344 + B158DRAFT_0775 0.73 -1.6
781,352 - B158DRAFT_0775 0.75 -1.2
781,428 + +0.4
781,436 - -1.3

Or see this region's nucleotide sequence