Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0757 and B158DRAFT_0758 are separated by 242 nucleotides B158DRAFT_0758 and B158DRAFT_0759 overlap by 1 nucleotides B158DRAFT_0759 and B158DRAFT_0760 overlap by 1 nucleotides
B158DRAFT_0757: B158DRAFT_0757 - penicillin-binding protein, 1A family, at 762,291 to 764,933
_0757
B158DRAFT_0758: B158DRAFT_0758 - type IV pilus assembly protein PilM, at 765,176 to 766,243
_0758
B158DRAFT_0759: B158DRAFT_0759 - Tfp pilus assembly protein PilN, at 766,243 to 766,818
_0759
B158DRAFT_0760: B158DRAFT_0760 - Tfp pilus assembly protein PilO, at 766,818 to 767,447
_0760
Position (kb) 765
766
767 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 764.601 kb on - strand, within B158DRAFT_0757 at 764.603 kb on + strand, within B158DRAFT_0757 at 764.997 kb on - strand at 765.140 kb on - strand at 765.163 kb on - strand at 765.187 kb on - strand at 765.187 kb on - strand at 765.206 kb on + strand at 765.229 kb on + strand at 765.318 kb on + strand, within B158DRAFT_0758 at 765.467 kb on + strand, within B158DRAFT_0758 at 765.471 kb on + strand, within B158DRAFT_0758 at 765.510 kb on - strand, within B158DRAFT_0758 at 765.510 kb on - strand, within B158DRAFT_0758 at 765.525 kb on - strand, within B158DRAFT_0758 at 765.541 kb on + strand, within B158DRAFT_0758 at 765.568 kb on - strand, within B158DRAFT_0758 at 765.743 kb on - strand, within B158DRAFT_0758 at 765.785 kb on + strand, within B158DRAFT_0758 at 765.795 kb on + strand, within B158DRAFT_0758 at 765.795 kb on + strand, within B158DRAFT_0758 at 765.795 kb on + strand, within B158DRAFT_0758 at 765.841 kb on + strand, within B158DRAFT_0758 at 765.951 kb on + strand, within B158DRAFT_0758 at 766.010 kb on - strand, within B158DRAFT_0758 at 766.177 kb on + strand at 766.177 kb on + strand at 766.185 kb on - strand at 766.575 kb on - strand, within B158DRAFT_0759 at 766.577 kb on + strand, within B158DRAFT_0759 at 766.585 kb on - strand, within B158DRAFT_0759 at 766.731 kb on + strand, within B158DRAFT_0759 at 766.778 kb on - strand at 766.810 kb on + strand at 766.899 kb on + strand, within B158DRAFT_0760 at 766.954 kb on + strand, within B158DRAFT_0760 at 766.956 kb on + strand, within B158DRAFT_0760 at 766.957 kb on - strand, within B158DRAFT_0760 at 766.962 kb on - strand, within B158DRAFT_0760 at 766.964 kb on - strand, within B158DRAFT_0760 at 766.973 kb on + strand, within B158DRAFT_0760 at 766.973 kb on + strand, within B158DRAFT_0760 at 766.973 kb on + strand, within B158DRAFT_0760 at 766.973 kb on + strand, within B158DRAFT_0760 at 767.036 kb on + strand, within B158DRAFT_0760 at 767.036 kb on + strand, within B158DRAFT_0760 at 767.079 kb on - strand, within B158DRAFT_0760 at 767.158 kb on + strand, within B158DRAFT_0760
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 764,601 - B158DRAFT_0757 0.87 +2.4 764,603 + B158DRAFT_0757 0.87 +1.5 764,997 - +1.0 765,140 - +0.9 765,163 - -0.1 765,187 - +1.5 765,187 - +1.7 765,206 + +2.0 765,229 + +1.3 765,318 + B158DRAFT_0758 0.13 +0.9 765,467 + B158DRAFT_0758 0.27 +1.2 765,471 + B158DRAFT_0758 0.28 +1.3 765,510 - B158DRAFT_0758 0.31 +1.7 765,510 - B158DRAFT_0758 0.31 +1.2 765,525 - B158DRAFT_0758 0.33 +2.8 765,541 + B158DRAFT_0758 0.34 +2.5 765,568 - B158DRAFT_0758 0.37 +1.8 765,743 - B158DRAFT_0758 0.53 +2.2 765,785 + B158DRAFT_0758 0.57 +1.4 765,795 + B158DRAFT_0758 0.58 +1.1 765,795 + B158DRAFT_0758 0.58 +0.5 765,795 + B158DRAFT_0758 0.58 +1.1 765,841 + B158DRAFT_0758 0.62 +0.2 765,951 + B158DRAFT_0758 0.73 +3.0 766,010 - B158DRAFT_0758 0.78 -0.6 766,177 + +1.7 766,177 + +0.9 766,185 - +2.1 766,575 - B158DRAFT_0759 0.58 +0.8 766,577 + B158DRAFT_0759 0.58 -0.5 766,585 - B158DRAFT_0759 0.59 +0.2 766,731 + B158DRAFT_0759 0.85 -0.4 766,778 - +0.6 766,810 + -0.2 766,899 + B158DRAFT_0760 0.13 -0.6 766,954 + B158DRAFT_0760 0.22 +0.9 766,956 + B158DRAFT_0760 0.22 +1.9 766,957 - B158DRAFT_0760 0.22 +0.5 766,962 - B158DRAFT_0760 0.23 +0.9 766,964 - B158DRAFT_0760 0.23 +0.9 766,973 + B158DRAFT_0760 0.25 +0.6 766,973 + B158DRAFT_0760 0.25 +0.0 766,973 + B158DRAFT_0760 0.25 +1.4 766,973 + B158DRAFT_0760 0.25 +0.7 767,036 + B158DRAFT_0760 0.35 -0.5 767,036 + B158DRAFT_0760 0.35 +1.1 767,079 - B158DRAFT_0760 0.41 +1.5 767,158 + B158DRAFT_0760 0.54 +4.4
Or see this region's nucleotide sequence