Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0679 and B158DRAFT_0680 are separated by 16 nucleotides B158DRAFT_0680 and B158DRAFT_0681 are separated by 68 nucleotides B158DRAFT_0681 and B158DRAFT_0682 are separated by 24 nucleotides B158DRAFT_0682 and B158DRAFT_0683 are separated by 149 nucleotides
B158DRAFT_0679: B158DRAFT_0679 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 680,898 to 681,845
_0679
B158DRAFT_0680: B158DRAFT_0680 - Predicted membrane protein, at 681,862 to 682,188
_0680
B158DRAFT_0681: B158DRAFT_0681 - Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides, at 682,257 to 682,553
_0681
B158DRAFT_0682: B158DRAFT_0682 - Disulfide bond formation protein DsbB, at 682,578 to 683,090
_0682
B158DRAFT_0683: B158DRAFT_0683 - Transcriptional accessory protein, at 683,240 to 685,561
_0683
Position (kb) 682
683 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 681.301 kb on + strand, within B158DRAFT_0679 at 681.307 kb on - strand, within B158DRAFT_0679 at 681.365 kb on - strand, within B158DRAFT_0679 at 681.365 kb on - strand, within B158DRAFT_0679 at 681.365 kb on - strand, within B158DRAFT_0679 at 681.408 kb on + strand, within B158DRAFT_0679 at 681.416 kb on - strand, within B158DRAFT_0679 at 681.416 kb on - strand, within B158DRAFT_0679 at 681.497 kb on - strand, within B158DRAFT_0679 at 681.561 kb on + strand, within B158DRAFT_0679 at 681.580 kb on + strand, within B158DRAFT_0679 at 681.583 kb on - strand, within B158DRAFT_0679 at 681.588 kb on - strand, within B158DRAFT_0679 at 681.636 kb on - strand, within B158DRAFT_0679 at 681.686 kb on + strand, within B158DRAFT_0679 at 681.734 kb on - strand, within B158DRAFT_0679 at 681.748 kb on + strand, within B158DRAFT_0679 at 681.749 kb on - strand, within B158DRAFT_0679 at 681.756 kb on - strand at 681.781 kb on + strand at 681.783 kb on + strand at 681.795 kb on + strand at 682.008 kb on + strand, within B158DRAFT_0680 at 682.018 kb on + strand, within B158DRAFT_0680 at 682.056 kb on - strand, within B158DRAFT_0680 at 682.060 kb on - strand, within B158DRAFT_0680 at 682.098 kb on - strand, within B158DRAFT_0680 at 682.303 kb on + strand, within B158DRAFT_0681 at 682.335 kb on + strand, within B158DRAFT_0681 at 682.343 kb on - strand, within B158DRAFT_0681 at 682.357 kb on + strand, within B158DRAFT_0681 at 682.357 kb on + strand, within B158DRAFT_0681 at 682.372 kb on - strand, within B158DRAFT_0681 at 682.452 kb on - strand, within B158DRAFT_0681 at 682.570 kb on - strand at 682.575 kb on + strand at 682.611 kb on - strand at 682.611 kb on - strand at 682.611 kb on - strand at 682.611 kb on - strand at 682.611 kb on - strand at 682.621 kb on - strand at 682.626 kb on + strand at 682.634 kb on - strand, within B158DRAFT_0682 at 682.727 kb on - strand, within B158DRAFT_0682 at 682.770 kb on + strand, within B158DRAFT_0682 at 682.783 kb on + strand, within B158DRAFT_0682 at 682.783 kb on + strand, within B158DRAFT_0682 at 682.786 kb on - strand, within B158DRAFT_0682 at 682.788 kb on + strand, within B158DRAFT_0682 at 682.999 kb on - strand, within B158DRAFT_0682 at 683.131 kb on + strand at 683.147 kb on - strand at 683.173 kb on - strand at 683.201 kb on + strand at 683.246 kb on + strand at 683.286 kb on + strand at 683.342 kb on + strand at 683.342 kb on + strand at 683.376 kb on - strand at 683.397 kb on + strand at 683.397 kb on + strand at 683.397 kb on + strand at 683.397 kb on + strand at 683.397 kb on + strand at 683.397 kb on + strand at 683.465 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 681,301 + B158DRAFT_0679 0.43 -0.7 681,307 - B158DRAFT_0679 0.43 -3.4 681,365 - B158DRAFT_0679 0.49 -0.8 681,365 - B158DRAFT_0679 0.49 -1.5 681,365 - B158DRAFT_0679 0.49 -1.3 681,408 + B158DRAFT_0679 0.54 -1.0 681,416 - B158DRAFT_0679 0.55 -1.8 681,416 - B158DRAFT_0679 0.55 -1.2 681,497 - B158DRAFT_0679 0.63 +0.1 681,561 + B158DRAFT_0679 0.70 -2.2 681,580 + B158DRAFT_0679 0.72 -2.0 681,583 - B158DRAFT_0679 0.72 -0.6 681,588 - B158DRAFT_0679 0.73 -2.0 681,636 - B158DRAFT_0679 0.78 +0.4 681,686 + B158DRAFT_0679 0.83 -2.0 681,734 - B158DRAFT_0679 0.88 -0.6 681,748 + B158DRAFT_0679 0.90 -1.2 681,749 - B158DRAFT_0679 0.90 -1.3 681,756 - +0.0 681,781 + +0.0 681,783 + -1.6 681,795 + -0.0 682,008 + B158DRAFT_0680 0.45 +0.3 682,018 + B158DRAFT_0680 0.48 +1.6 682,056 - B158DRAFT_0680 0.59 -0.6 682,060 - B158DRAFT_0680 0.61 -1.3 682,098 - B158DRAFT_0680 0.72 -3.5 682,303 + B158DRAFT_0681 0.15 +6.6 682,335 + B158DRAFT_0681 0.26 +6.7 682,343 - B158DRAFT_0681 0.29 +6.3 682,357 + B158DRAFT_0681 0.34 +6.6 682,357 + B158DRAFT_0681 0.34 +6.2 682,372 - B158DRAFT_0681 0.39 +6.8 682,452 - B158DRAFT_0681 0.66 +6.4 682,570 - +4.9 682,575 + +6.0 682,611 - +2.9 682,611 - +1.5 682,611 - +2.6 682,611 - +2.9 682,611 - +2.7 682,621 - +1.7 682,626 + +4.8 682,634 - B158DRAFT_0682 0.11 -1.1 682,727 - B158DRAFT_0682 0.29 +1.2 682,770 + B158DRAFT_0682 0.37 +0.6 682,783 + B158DRAFT_0682 0.40 +1.5 682,783 + B158DRAFT_0682 0.40 -0.1 682,786 - B158DRAFT_0682 0.41 +0.8 682,788 + B158DRAFT_0682 0.41 +2.1 682,999 - B158DRAFT_0682 0.82 -2.0 683,131 + -1.8 683,147 - +0.0 683,173 - +0.2 683,201 + +0.2 683,246 + +0.7 683,286 + +2.3 683,342 + +3.7 683,342 + +2.5 683,376 - +1.6 683,397 + +3.6 683,397 + +2.8 683,397 + +2.2 683,397 + +2.6 683,397 + +1.9 683,397 + +2.1 683,465 + +2.6
Or see this region's nucleotide sequence