Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0639 and B158DRAFT_0640 are separated by 12 nucleotides B158DRAFT_0640 and B158DRAFT_0641 are separated by 229 nucleotides B158DRAFT_0641 and B158DRAFT_0642 are separated by 37 nucleotides
B158DRAFT_0639: B158DRAFT_0639 - Predicted transcriptional regulator, contains C-terminal CBS domains, at 648,389 to 648,793
_0639
B158DRAFT_0640: B158DRAFT_0640 - Uncharacterized protein conserved in bacteria, at 648,806 to 649,024
_0640
B158DRAFT_0641: B158DRAFT_0641 - hypothetical protein, at 649,254 to 649,631
_0641
B158DRAFT_0642: B158DRAFT_0642 - Membrane-associated lipoprotein involved in thiamine biosynthesis, at 649,669 to 650,700
_0642
Position (kb) 649
650 Strain fitness (log2 ratio) -2
-1
0
1 at 648.297 kb on + strand at 648.391 kb on + strand at 648.470 kb on + strand, within B158DRAFT_0639 at 648.470 kb on + strand, within B158DRAFT_0639 at 648.470 kb on + strand, within B158DRAFT_0639 at 648.558 kb on + strand, within B158DRAFT_0639 at 648.608 kb on + strand, within B158DRAFT_0639 at 648.658 kb on - strand, within B158DRAFT_0639 at 649.138 kb on - strand at 649.151 kb on + strand at 649.159 kb on - strand at 649.203 kb on + strand at 649.311 kb on + strand, within B158DRAFT_0641 at 649.313 kb on + strand, within B158DRAFT_0641 at 649.378 kb on + strand, within B158DRAFT_0641 at 649.383 kb on + strand, within B158DRAFT_0641 at 649.386 kb on - strand, within B158DRAFT_0641 at 649.549 kb on + strand, within B158DRAFT_0641 at 649.566 kb on + strand, within B158DRAFT_0641 at 649.566 kb on + strand, within B158DRAFT_0641 at 649.574 kb on - strand, within B158DRAFT_0641 at 649.626 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 648,297 + -0.8 648,391 + +0.4 648,470 + B158DRAFT_0639 0.20 +0.4 648,470 + B158DRAFT_0639 0.20 +1.3 648,470 + B158DRAFT_0639 0.20 -0.8 648,558 + B158DRAFT_0639 0.42 -1.8 648,608 + B158DRAFT_0639 0.54 -1.1 648,658 - B158DRAFT_0639 0.66 +1.2 649,138 - -0.5 649,151 + -0.9 649,159 - -0.8 649,203 + -1.2 649,311 + B158DRAFT_0641 0.15 -0.7 649,313 + B158DRAFT_0641 0.16 -0.9 649,378 + B158DRAFT_0641 0.33 -2.6 649,383 + B158DRAFT_0641 0.34 +0.1 649,386 - B158DRAFT_0641 0.35 +1.4 649,549 + B158DRAFT_0641 0.78 -1.4 649,566 + B158DRAFT_0641 0.83 -0.8 649,566 + B158DRAFT_0641 0.83 -1.6 649,574 - B158DRAFT_0641 0.85 +0.3 649,626 + +0.9
Or see this region's nucleotide sequence