Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0622 and B158DRAFT_0623 overlap by 20 nucleotides B158DRAFT_0623 and B158DRAFT_0624 are separated by 263 nucleotides B158DRAFT_0624 and B158DRAFT_0625 overlap by 4 nucleotides
B158DRAFT_0622: B158DRAFT_0622 - hypothetical protein, at 631,475 to 632,071
_0622
B158DRAFT_0623: B158DRAFT_0623 - hypothetical protein, at 632,052 to 632,540
_0623
B158DRAFT_0624: B158DRAFT_0624 - Fatty-acid desaturase, at 632,804 to 633,715
_0624
B158DRAFT_0625: B158DRAFT_0625 - Predicted NAD/FAD-binding protein, at 633,712 to 634,983
_0625
Position (kb) 632
633
634 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 631.862 kb on - strand, within B158DRAFT_0622 at 631.862 kb on - strand, within B158DRAFT_0622 at 631.862 kb on - strand, within B158DRAFT_0622 at 631.862 kb on - strand, within B158DRAFT_0622 at 631.862 kb on - strand, within B158DRAFT_0622 at 631.959 kb on + strand, within B158DRAFT_0622 at 631.959 kb on + strand, within B158DRAFT_0622 at 631.959 kb on + strand, within B158DRAFT_0622 at 631.959 kb on + strand, within B158DRAFT_0622 at 631.962 kb on - strand, within B158DRAFT_0622 at 631.965 kb on + strand, within B158DRAFT_0622 at 631.967 kb on - strand, within B158DRAFT_0622 at 631.967 kb on - strand, within B158DRAFT_0622 at 631.968 kb on - strand, within B158DRAFT_0622 at 631.973 kb on - strand, within B158DRAFT_0622 at 631.973 kb on - strand, within B158DRAFT_0622 at 631.975 kb on + strand, within B158DRAFT_0622 at 631.994 kb on + strand, within B158DRAFT_0622 at 632.047 kb on + strand at 632.242 kb on - strand, within B158DRAFT_0623 at 632.242 kb on - strand, within B158DRAFT_0623 at 632.266 kb on + strand, within B158DRAFT_0623 at 632.295 kb on + strand, within B158DRAFT_0623 at 632.325 kb on - strand, within B158DRAFT_0623 at 632.331 kb on - strand, within B158DRAFT_0623 at 632.359 kb on - strand, within B158DRAFT_0623 at 632.428 kb on + strand, within B158DRAFT_0623 at 632.428 kb on + strand, within B158DRAFT_0623 at 632.436 kb on - strand, within B158DRAFT_0623 at 632.851 kb on + strand at 632.856 kb on + strand at 632.856 kb on + strand at 632.866 kb on + strand at 632.906 kb on + strand, within B158DRAFT_0624 at 632.906 kb on + strand, within B158DRAFT_0624 at 632.947 kb on + strand, within B158DRAFT_0624 at 632.947 kb on + strand, within B158DRAFT_0624 at 632.955 kb on - strand, within B158DRAFT_0624 at 632.955 kb on - strand, within B158DRAFT_0624 at 632.955 kb on - strand, within B158DRAFT_0624 at 633.087 kb on - strand, within B158DRAFT_0624 at 633.090 kb on + strand, within B158DRAFT_0624 at 633.098 kb on - strand, within B158DRAFT_0624 at 633.098 kb on - strand, within B158DRAFT_0624 at 633.098 kb on - strand, within B158DRAFT_0624 at 633.098 kb on - strand, within B158DRAFT_0624 at 633.100 kb on + strand, within B158DRAFT_0624 at 633.100 kb on - strand, within B158DRAFT_0624 at 633.108 kb on - strand, within B158DRAFT_0624 at 633.108 kb on - strand, within B158DRAFT_0624 at 633.182 kb on - strand, within B158DRAFT_0624 at 633.182 kb on - strand, within B158DRAFT_0624 at 633.251 kb on + strand, within B158DRAFT_0624 at 633.259 kb on - strand, within B158DRAFT_0624 at 633.270 kb on + strand, within B158DRAFT_0624 at 633.278 kb on - strand, within B158DRAFT_0624 at 633.326 kb on + strand, within B158DRAFT_0624 at 633.326 kb on + strand, within B158DRAFT_0624 at 633.326 kb on + strand, within B158DRAFT_0624 at 633.326 kb on + strand, within B158DRAFT_0624 at 633.339 kb on + strand, within B158DRAFT_0624 at 633.366 kb on + strand, within B158DRAFT_0624 at 633.366 kb on + strand, within B158DRAFT_0624 at 633.374 kb on - strand, within B158DRAFT_0624 at 633.395 kb on + strand, within B158DRAFT_0624 at 633.395 kb on + strand, within B158DRAFT_0624 at 633.403 kb on - strand, within B158DRAFT_0624 at 633.530 kb on + strand, within B158DRAFT_0624 at 633.530 kb on + strand, within B158DRAFT_0624 at 633.530 kb on + strand, within B158DRAFT_0624 at 633.538 kb on - strand, within B158DRAFT_0624 at 633.665 kb on + strand at 633.803 kb on + strand at 633.907 kb on + strand, within B158DRAFT_0625 at 633.985 kb on - strand, within B158DRAFT_0625 at 634.011 kb on - strand, within B158DRAFT_0625 at 634.232 kb on - strand, within B158DRAFT_0625 at 634.234 kb on - strand, within B158DRAFT_0625 at 634.241 kb on - strand, within B158DRAFT_0625 at 634.296 kb on - strand, within B158DRAFT_0625 at 634.343 kb on + strand, within B158DRAFT_0625 at 634.460 kb on + strand, within B158DRAFT_0625 at 634.639 kb on + strand, within B158DRAFT_0625 at 634.639 kb on + strand, within B158DRAFT_0625 at 634.683 kb on + strand, within B158DRAFT_0625 at 634.686 kb on - strand, within B158DRAFT_0625
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 631,862 - B158DRAFT_0622 0.65 -1.7 631,862 - B158DRAFT_0622 0.65 +0.1 631,862 - B158DRAFT_0622 0.65 -2.1 631,862 - B158DRAFT_0622 0.65 -1.1 631,862 - B158DRAFT_0622 0.65 +1.5 631,959 + B158DRAFT_0622 0.81 +0.8 631,959 + B158DRAFT_0622 0.81 -0.3 631,959 + B158DRAFT_0622 0.81 -0.4 631,959 + B158DRAFT_0622 0.81 -1.1 631,962 - B158DRAFT_0622 0.82 -1.5 631,965 + B158DRAFT_0622 0.82 -0.5 631,967 - B158DRAFT_0622 0.82 -0.6 631,967 - B158DRAFT_0622 0.82 +0.2 631,968 - B158DRAFT_0622 0.83 -1.4 631,973 - B158DRAFT_0622 0.83 -1.1 631,973 - B158DRAFT_0622 0.83 -1.6 631,975 + B158DRAFT_0622 0.84 -0.6 631,994 + B158DRAFT_0622 0.87 -1.3 632,047 + +1.5 632,242 - B158DRAFT_0623 0.39 -0.3 632,242 - B158DRAFT_0623 0.39 +1.1 632,266 + B158DRAFT_0623 0.44 +0.8 632,295 + B158DRAFT_0623 0.50 -0.5 632,325 - B158DRAFT_0623 0.56 -0.9 632,331 - B158DRAFT_0623 0.57 -1.3 632,359 - B158DRAFT_0623 0.63 -1.1 632,428 + B158DRAFT_0623 0.77 -0.5 632,428 + B158DRAFT_0623 0.77 -0.3 632,436 - B158DRAFT_0623 0.79 -2.2 632,851 + -0.6 632,856 + -0.8 632,856 + +1.2 632,866 + -1.5 632,906 + B158DRAFT_0624 0.11 -1.4 632,906 + B158DRAFT_0624 0.11 -0.7 632,947 + B158DRAFT_0624 0.16 +0.4 632,947 + B158DRAFT_0624 0.16 -0.1 632,955 - B158DRAFT_0624 0.17 -1.1 632,955 - B158DRAFT_0624 0.17 -1.1 632,955 - B158DRAFT_0624 0.17 -1.3 633,087 - B158DRAFT_0624 0.31 -1.0 633,090 + B158DRAFT_0624 0.31 +1.3 633,098 - B158DRAFT_0624 0.32 -0.4 633,098 - B158DRAFT_0624 0.32 +0.2 633,098 - B158DRAFT_0624 0.32 -0.8 633,098 - B158DRAFT_0624 0.32 -1.5 633,100 + B158DRAFT_0624 0.32 -1.7 633,100 - B158DRAFT_0624 0.32 -0.3 633,108 - B158DRAFT_0624 0.33 +0.2 633,108 - B158DRAFT_0624 0.33 +0.2 633,182 - B158DRAFT_0624 0.41 -1.9 633,182 - B158DRAFT_0624 0.41 -2.3 633,251 + B158DRAFT_0624 0.49 -0.9 633,259 - B158DRAFT_0624 0.50 +0.3 633,270 + B158DRAFT_0624 0.51 -3.1 633,278 - B158DRAFT_0624 0.52 -0.9 633,326 + B158DRAFT_0624 0.57 +0.2 633,326 + B158DRAFT_0624 0.57 -1.8 633,326 + B158DRAFT_0624 0.57 -1.5 633,326 + B158DRAFT_0624 0.57 -0.9 633,339 + B158DRAFT_0624 0.59 -1.8 633,366 + B158DRAFT_0624 0.62 -1.3 633,366 + B158DRAFT_0624 0.62 +0.5 633,374 - B158DRAFT_0624 0.62 -2.2 633,395 + B158DRAFT_0624 0.65 -1.7 633,395 + B158DRAFT_0624 0.65 +0.2 633,403 - B158DRAFT_0624 0.66 -0.7 633,530 + B158DRAFT_0624 0.80 -0.1 633,530 + B158DRAFT_0624 0.80 -0.3 633,530 + B158DRAFT_0624 0.80 +0.5 633,538 - B158DRAFT_0624 0.80 -0.0 633,665 + +0.8 633,803 + -1.8 633,907 + B158DRAFT_0625 0.15 -1.2 633,985 - B158DRAFT_0625 0.21 +2.9 634,011 - B158DRAFT_0625 0.24 -1.3 634,232 - B158DRAFT_0625 0.41 -1.6 634,234 - B158DRAFT_0625 0.41 -0.9 634,241 - B158DRAFT_0625 0.42 -0.5 634,296 - B158DRAFT_0625 0.46 -0.7 634,343 + B158DRAFT_0625 0.50 -0.0 634,460 + B158DRAFT_0625 0.59 +0.3 634,639 + B158DRAFT_0625 0.73 -0.2 634,639 + B158DRAFT_0625 0.73 -0.8 634,683 + B158DRAFT_0625 0.76 -0.3 634,686 - B158DRAFT_0625 0.77 -0.3
Or see this region's nucleotide sequence