Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0394 and B158DRAFT_0395 are separated by 14 nucleotides B158DRAFT_0395 and B158DRAFT_0396 are separated by 85 nucleotides
B158DRAFT_0394: B158DRAFT_0394 - potassium uptake protein, TrkH family, at 398,871 to 400,319
_0394
B158DRAFT_0395: B158DRAFT_0395 - K+ transport systems, NAD-binding component, at 400,334 to 401,707
_0395
B158DRAFT_0396: B158DRAFT_0396 - ribosomal RNA small subunit methyltransferase RsmB, at 401,793 to 403,124
_0396
Position (kb) 400
401
402 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 400.330 kb on - strand at 400.330 kb on - strand at 400.330 kb on - strand at 400.335 kb on - strand at 401.814 kb on - strand at 401.921 kb on - strand at 401.960 kb on + strand, within B158DRAFT_0396 at 402.018 kb on - strand, within B158DRAFT_0396 at 402.079 kb on + strand, within B158DRAFT_0396 at 402.087 kb on - strand, within B158DRAFT_0396 at 402.140 kb on - strand, within B158DRAFT_0396 at 402.147 kb on - strand, within B158DRAFT_0396 at 402.264 kb on + strand, within B158DRAFT_0396 at 402.266 kb on - strand, within B158DRAFT_0396 at 402.284 kb on + strand, within B158DRAFT_0396 at 402.284 kb on + strand, within B158DRAFT_0396 at 402.284 kb on + strand, within B158DRAFT_0396 at 402.284 kb on + strand, within B158DRAFT_0396 at 402.284 kb on + strand, within B158DRAFT_0396 at 402.284 kb on + strand, within B158DRAFT_0396 at 402.292 kb on - strand, within B158DRAFT_0396 at 402.292 kb on - strand, within B158DRAFT_0396 at 402.302 kb on + strand, within B158DRAFT_0396 at 402.340 kb on - strand, within B158DRAFT_0396 at 402.355 kb on + strand, within B158DRAFT_0396 at 402.360 kb on + strand, within B158DRAFT_0396 at 402.363 kb on - strand, within B158DRAFT_0396 at 402.405 kb on + strand, within B158DRAFT_0396 at 402.405 kb on + strand, within B158DRAFT_0396 at 402.405 kb on + strand, within B158DRAFT_0396 at 402.413 kb on - strand, within B158DRAFT_0396 at 402.446 kb on + strand, within B158DRAFT_0396 at 402.494 kb on + strand, within B158DRAFT_0396 at 402.516 kb on - strand, within B158DRAFT_0396 at 402.516 kb on - strand, within B158DRAFT_0396 at 402.516 kb on - strand, within B158DRAFT_0396 at 402.516 kb on - strand, within B158DRAFT_0396 at 402.516 kb on - strand, within B158DRAFT_0396 at 402.530 kb on + strand, within B158DRAFT_0396 at 402.538 kb on - strand, within B158DRAFT_0396 at 402.563 kb on + strand, within B158DRAFT_0396 at 402.563 kb on + strand, within B158DRAFT_0396 at 402.563 kb on + strand, within B158DRAFT_0396 at 402.569 kb on + strand, within B158DRAFT_0396 at 402.577 kb on - strand, within B158DRAFT_0396 at 402.593 kb on + strand, within B158DRAFT_0396
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 400,330 - -1.7 400,330 - -1.3 400,330 - +0.3 400,335 - -1.7 401,814 - +2.5 401,921 - -0.3 401,960 + B158DRAFT_0396 0.13 +1.5 402,018 - B158DRAFT_0396 0.17 -0.6 402,079 + B158DRAFT_0396 0.21 -1.9 402,087 - B158DRAFT_0396 0.22 -1.8 402,140 - B158DRAFT_0396 0.26 -1.4 402,147 - B158DRAFT_0396 0.27 -0.6 402,264 + B158DRAFT_0396 0.35 -1.1 402,266 - B158DRAFT_0396 0.36 +0.4 402,284 + B158DRAFT_0396 0.37 +0.0 402,284 + B158DRAFT_0396 0.37 -0.6 402,284 + B158DRAFT_0396 0.37 -0.6 402,284 + B158DRAFT_0396 0.37 -2.6 402,284 + B158DRAFT_0396 0.37 +0.2 402,284 + B158DRAFT_0396 0.37 -2.8 402,292 - B158DRAFT_0396 0.37 +2.9 402,292 - B158DRAFT_0396 0.37 -1.8 402,302 + B158DRAFT_0396 0.38 +2.5 402,340 - B158DRAFT_0396 0.41 +0.2 402,355 + B158DRAFT_0396 0.42 -0.6 402,360 + B158DRAFT_0396 0.43 -0.3 402,363 - B158DRAFT_0396 0.43 +0.8 402,405 + B158DRAFT_0396 0.46 +0.2 402,405 + B158DRAFT_0396 0.46 +1.4 402,405 + B158DRAFT_0396 0.46 -0.9 402,413 - B158DRAFT_0396 0.47 -1.5 402,446 + B158DRAFT_0396 0.49 -0.9 402,494 + B158DRAFT_0396 0.53 -0.9 402,516 - B158DRAFT_0396 0.54 -0.5 402,516 - B158DRAFT_0396 0.54 +0.7 402,516 - B158DRAFT_0396 0.54 -1.2 402,516 - B158DRAFT_0396 0.54 +0.4 402,516 - B158DRAFT_0396 0.54 +1.0 402,530 + B158DRAFT_0396 0.55 -1.8 402,538 - B158DRAFT_0396 0.56 +1.0 402,563 + B158DRAFT_0396 0.58 -1.5 402,563 + B158DRAFT_0396 0.58 -1.0 402,563 + B158DRAFT_0396 0.58 -1.5 402,569 + B158DRAFT_0396 0.58 -0.8 402,577 - B158DRAFT_0396 0.59 +0.6 402,593 + B158DRAFT_0396 0.60 -0.8
Or see this region's nucleotide sequence