Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0314 and B158DRAFT_0315 are separated by 124 nucleotides B158DRAFT_0315 and B158DRAFT_0316 are separated by 51 nucleotides B158DRAFT_0316 and B158DRAFT_0317 are separated by 137 nucleotides
B158DRAFT_0314: B158DRAFT_0314 - hypothetical protein, at 317,377 to 317,808
_0314
B158DRAFT_0315: B158DRAFT_0315 - Cytochrome B561, at 317,933 to 318,469
_0315
B158DRAFT_0316: B158DRAFT_0316 - hypothetical protein, at 318,521 to 319,351
_0316
B158DRAFT_0317: B158DRAFT_0317 - catalase/peroxidase HPI, at 319,489 to 321,645
_0317
Position (kb) 318
319
320 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 317.748 kb on + strand, within B158DRAFT_0314 at 317.756 kb on - strand, within B158DRAFT_0314 at 317.789 kb on + strand at 317.854 kb on + strand at 318.135 kb on - strand, within B158DRAFT_0315 at 318.135 kb on - strand, within B158DRAFT_0315 at 318.172 kb on - strand, within B158DRAFT_0315 at 318.177 kb on + strand, within B158DRAFT_0315 at 318.182 kb on - strand, within B158DRAFT_0315 at 318.305 kb on + strand, within B158DRAFT_0315 at 318.313 kb on + strand, within B158DRAFT_0315 at 318.329 kb on + strand, within B158DRAFT_0315 at 318.337 kb on - strand, within B158DRAFT_0315 at 318.421 kb on + strand at 318.487 kb on - strand at 318.589 kb on - strand at 318.589 kb on - strand at 318.724 kb on + strand, within B158DRAFT_0316 at 318.754 kb on - strand, within B158DRAFT_0316 at 318.966 kb on + strand, within B158DRAFT_0316 at 319.101 kb on - strand, within B158DRAFT_0316 at 319.141 kb on + strand, within B158DRAFT_0316 at 319.180 kb on - strand, within B158DRAFT_0316 at 319.180 kb on - strand, within B158DRAFT_0316 at 319.180 kb on - strand, within B158DRAFT_0316 at 319.477 kb on + strand at 319.988 kb on - strand, within B158DRAFT_0317 at 320.001 kb on - strand, within B158DRAFT_0317 at 320.228 kb on - strand, within B158DRAFT_0317 at 320.251 kb on - strand, within B158DRAFT_0317 at 320.275 kb on + strand, within B158DRAFT_0317 at 320.327 kb on - strand, within B158DRAFT_0317
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 317,748 + B158DRAFT_0314 0.86 -0.1 317,756 - B158DRAFT_0314 0.88 -0.1 317,789 + +0.3 317,854 + -1.0 318,135 - B158DRAFT_0315 0.38 +1.3 318,135 - B158DRAFT_0315 0.38 -2.0 318,172 - B158DRAFT_0315 0.45 -0.9 318,177 + B158DRAFT_0315 0.45 -0.1 318,182 - B158DRAFT_0315 0.46 -1.5 318,305 + B158DRAFT_0315 0.69 -0.0 318,313 + B158DRAFT_0315 0.71 +2.6 318,329 + B158DRAFT_0315 0.74 +1.6 318,337 - B158DRAFT_0315 0.75 -1.3 318,421 + -0.3 318,487 - -1.3 318,589 - -2.4 318,589 - +0.5 318,724 + B158DRAFT_0316 0.24 -0.4 318,754 - B158DRAFT_0316 0.28 -1.6 318,966 + B158DRAFT_0316 0.54 +0.7 319,101 - B158DRAFT_0316 0.70 -0.9 319,141 + B158DRAFT_0316 0.75 -0.3 319,180 - B158DRAFT_0316 0.79 +1.5 319,180 - B158DRAFT_0316 0.79 -0.5 319,180 - B158DRAFT_0316 0.79 -0.6 319,477 + -0.5 319,988 - B158DRAFT_0317 0.23 -2.9 320,001 - B158DRAFT_0317 0.24 -0.8 320,228 - B158DRAFT_0317 0.34 +1.7 320,251 - B158DRAFT_0317 0.35 -0.3 320,275 + B158DRAFT_0317 0.36 +0.5 320,327 - B158DRAFT_0317 0.39 -2.0
Or see this region's nucleotide sequence