Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0254 and B158DRAFT_0255 overlap by 4 nucleotides B158DRAFT_0255 and B158DRAFT_0256 are separated by 46 nucleotides B158DRAFT_0256 and B158DRAFT_0257 are separated by 288 nucleotides B158DRAFT_0257 and B158DRAFT_0258 are separated by 7 nucleotides
B158DRAFT_0254: B158DRAFT_0254 - Uncharacterized enzyme of heme biosynthesis, at 259,900 to 261,183
_0254
B158DRAFT_0255: B158DRAFT_0255 - Uncharacterized enzyme of heme biosynthesis, at 261,180 to 262,406
_0255
B158DRAFT_0256: B158DRAFT_0256 - hypothetical protein, at 262,453 to 262,686
_0256
B158DRAFT_0257: B158DRAFT_0257 - conserved hypothetical metal-binding protein, at 262,975 to 263,238
_0257
B158DRAFT_0258: B158DRAFT_0258 - transporter, NhaC family (TC 2.A.35), at 263,246 to 264,598
_0258
Position (kb) 261
262
263 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.200 kb on + strand, within B158DRAFT_0254 at 260.208 kb on - strand, within B158DRAFT_0254 at 260.211 kb on + strand, within B158DRAFT_0254 at 260.433 kb on - strand, within B158DRAFT_0254 at 260.492 kb on + strand, within B158DRAFT_0254 at 260.560 kb on + strand, within B158DRAFT_0254 at 260.574 kb on + strand, within B158DRAFT_0254 at 260.574 kb on + strand, within B158DRAFT_0254 at 260.582 kb on - strand, within B158DRAFT_0254 at 260.591 kb on + strand, within B158DRAFT_0254 at 260.636 kb on + strand, within B158DRAFT_0254 at 260.782 kb on - strand, within B158DRAFT_0254 at 260.782 kb on - strand, within B158DRAFT_0254 at 260.790 kb on + strand, within B158DRAFT_0254 at 260.790 kb on + strand, within B158DRAFT_0254 at 260.790 kb on + strand, within B158DRAFT_0254 at 260.790 kb on + strand, within B158DRAFT_0254 at 260.790 kb on + strand, within B158DRAFT_0254 at 260.790 kb on + strand, within B158DRAFT_0254 at 260.790 kb on + strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.798 kb on - strand, within B158DRAFT_0254 at 260.835 kb on - strand, within B158DRAFT_0254 at 260.851 kb on + strand, within B158DRAFT_0254 at 260.869 kb on + strand, within B158DRAFT_0254 at 260.888 kb on + strand, within B158DRAFT_0254 at 260.896 kb on - strand, within B158DRAFT_0254 at 260.923 kb on + strand, within B158DRAFT_0254 at 260.942 kb on + strand, within B158DRAFT_0254 at 260.947 kb on + strand, within B158DRAFT_0254 at 260.965 kb on - strand, within B158DRAFT_0254 at 261.033 kb on - strand, within B158DRAFT_0254 at 261.038 kb on - strand, within B158DRAFT_0254 at 261.038 kb on - strand, within B158DRAFT_0254 at 261.112 kb on + strand at 261.118 kb on - strand at 261.161 kb on + strand at 261.161 kb on + strand at 261.161 kb on + strand at 261.161 kb on + strand at 261.161 kb on + strand at 261.161 kb on + strand at 261.161 kb on + strand at 261.161 kb on + strand at 261.164 kb on + strand at 261.169 kb on - strand at 261.169 kb on - strand at 261.169 kb on - strand at 261.169 kb on - strand at 261.169 kb on - strand at 261.169 kb on - strand at 261.169 kb on - strand at 261.169 kb on - strand at 261.341 kb on + strand, within B158DRAFT_0255 at 261.349 kb on - strand, within B158DRAFT_0255 at 261.349 kb on - strand, within B158DRAFT_0255 at 261.358 kb on - strand, within B158DRAFT_0255 at 261.422 kb on + strand, within B158DRAFT_0255 at 261.422 kb on + strand, within B158DRAFT_0255 at 261.430 kb on - strand, within B158DRAFT_0255 at 261.464 kb on + strand, within B158DRAFT_0255 at 261.464 kb on + strand, within B158DRAFT_0255 at 261.464 kb on + strand, within B158DRAFT_0255 at 261.464 kb on + strand, within B158DRAFT_0255 at 261.464 kb on + strand, within B158DRAFT_0255 at 261.472 kb on - strand, within B158DRAFT_0255 at 261.472 kb on - strand, within B158DRAFT_0255 at 261.472 kb on - strand, within B158DRAFT_0255 at 261.500 kb on + strand, within B158DRAFT_0255 at 261.500 kb on + strand, within B158DRAFT_0255 at 261.500 kb on + strand, within B158DRAFT_0255 at 261.500 kb on + strand, within B158DRAFT_0255 at 261.508 kb on - strand, within B158DRAFT_0255 at 261.508 kb on - strand, within B158DRAFT_0255 at 261.508 kb on - strand, within B158DRAFT_0255 at 261.508 kb on - strand, within B158DRAFT_0255 at 261.523 kb on + strand, within B158DRAFT_0255 at 261.533 kb on + strand, within B158DRAFT_0255 at 261.562 kb on + strand, within B158DRAFT_0255 at 261.570 kb on - strand, within B158DRAFT_0255 at 261.575 kb on - strand, within B158DRAFT_0255 at 261.579 kb on + strand, within B158DRAFT_0255 at 261.640 kb on + strand, within B158DRAFT_0255 at 261.645 kb on + strand, within B158DRAFT_0255 at 261.658 kb on - strand, within B158DRAFT_0255 at 261.714 kb on - strand, within B158DRAFT_0255 at 261.784 kb on + strand, within B158DRAFT_0255 at 261.854 kb on - strand, within B158DRAFT_0255 at 261.915 kb on + strand, within B158DRAFT_0255 at 261.928 kb on - strand, within B158DRAFT_0255 at 261.928 kb on - strand, within B158DRAFT_0255 at 261.928 kb on - strand, within B158DRAFT_0255 at 261.954 kb on - strand, within B158DRAFT_0255 at 261.954 kb on - strand, within B158DRAFT_0255 at 261.954 kb on - strand, within B158DRAFT_0255 at 261.970 kb on + strand, within B158DRAFT_0255 at 261.970 kb on + strand, within B158DRAFT_0255 at 261.973 kb on - strand, within B158DRAFT_0255 at 261.978 kb on - strand, within B158DRAFT_0255 at 261.978 kb on - strand, within B158DRAFT_0255 at 261.978 kb on - strand, within B158DRAFT_0255 at 261.978 kb on - strand, within B158DRAFT_0255 at 261.978 kb on - strand, within B158DRAFT_0255 at 262.006 kb on - strand, within B158DRAFT_0255 at 262.034 kb on + strand, within B158DRAFT_0255 at 262.042 kb on - strand, within B158DRAFT_0255 at 262.157 kb on - strand, within B158DRAFT_0255 at 262.167 kb on - strand, within B158DRAFT_0255 at 262.169 kb on + strand, within B158DRAFT_0255 at 262.177 kb on - strand, within B158DRAFT_0255 at 262.177 kb on - strand, within B158DRAFT_0255 at 262.177 kb on - strand, within B158DRAFT_0255 at 262.189 kb on - strand, within B158DRAFT_0255 at 262.269 kb on + strand, within B158DRAFT_0255 at 262.269 kb on - strand, within B158DRAFT_0255 at 262.271 kb on + strand, within B158DRAFT_0255 at 262.276 kb on + strand, within B158DRAFT_0255 at 262.279 kb on - strand, within B158DRAFT_0255 at 262.306 kb on + strand at 262.488 kb on + strand, within B158DRAFT_0256 at 262.488 kb on + strand, within B158DRAFT_0256 at 262.496 kb on - strand, within B158DRAFT_0256 at 262.496 kb on - strand, within B158DRAFT_0256 at 262.575 kb on - strand, within B158DRAFT_0256 at 262.620 kb on - strand, within B158DRAFT_0256 at 262.620 kb on - strand, within B158DRAFT_0256 at 262.628 kb on - strand, within B158DRAFT_0256 at 262.628 kb on - strand, within B158DRAFT_0256 at 262.690 kb on + strand at 262.734 kb on + strand at 262.749 kb on + strand at 262.821 kb on + strand at 262.929 kb on + strand at 262.929 kb on + strand at 262.929 kb on + strand at 262.931 kb on - strand at 262.933 kb on + strand at 262.937 kb on - strand at 262.937 kb on - strand at 262.937 kb on - strand at 262.942 kb on - strand at 262.950 kb on + strand at 262.981 kb on - strand at 263.132 kb on - strand, within B158DRAFT_0257 at 263.132 kb on - strand, within B158DRAFT_0257 at 263.251 kb on - strand at 263.272 kb on - strand at 263.272 kb on - strand at 263.304 kb on + strand at 263.345 kb on + strand at 263.351 kb on + strand at 263.374 kb on - strand at 263.376 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 260,200 + B158DRAFT_0254 0.23 +1.7 260,200 + B158DRAFT_0254 0.23 +1.9 260,200 + B158DRAFT_0254 0.23 +0.1 260,200 + B158DRAFT_0254 0.23 +2.3 260,200 + B158DRAFT_0254 0.23 +1.2 260,200 + B158DRAFT_0254 0.23 +1.3 260,200 + B158DRAFT_0254 0.23 +0.9 260,200 + B158DRAFT_0254 0.23 +1.8 260,200 + B158DRAFT_0254 0.23 +1.9 260,200 + B158DRAFT_0254 0.23 +2.0 260,208 - B158DRAFT_0254 0.24 +1.7 260,211 + B158DRAFT_0254 0.24 -0.2 260,433 - B158DRAFT_0254 0.42 +1.5 260,492 + B158DRAFT_0254 0.46 +0.2 260,560 + B158DRAFT_0254 0.51 +2.4 260,574 + B158DRAFT_0254 0.52 +2.2 260,574 + B158DRAFT_0254 0.52 +2.2 260,582 - B158DRAFT_0254 0.53 +1.8 260,591 + B158DRAFT_0254 0.54 +1.4 260,636 + B158DRAFT_0254 0.57 +2.0 260,782 - B158DRAFT_0254 0.69 +1.3 260,782 - B158DRAFT_0254 0.69 -0.8 260,790 + B158DRAFT_0254 0.69 +1.1 260,790 + B158DRAFT_0254 0.69 +1.6 260,790 + B158DRAFT_0254 0.69 +1.7 260,790 + B158DRAFT_0254 0.69 +1.8 260,790 + B158DRAFT_0254 0.69 +2.3 260,790 + B158DRAFT_0254 0.69 +1.4 260,790 + B158DRAFT_0254 0.69 +0.8 260,798 - B158DRAFT_0254 0.70 +2.4 260,798 - B158DRAFT_0254 0.70 +2.3 260,798 - B158DRAFT_0254 0.70 +2.1 260,798 - B158DRAFT_0254 0.70 +1.2 260,798 - B158DRAFT_0254 0.70 +1.5 260,798 - B158DRAFT_0254 0.70 +1.5 260,798 - B158DRAFT_0254 0.70 +1.8 260,798 - B158DRAFT_0254 0.70 +2.5 260,798 - B158DRAFT_0254 0.70 +1.6 260,798 - B158DRAFT_0254 0.70 +2.5 260,835 - B158DRAFT_0254 0.73 +1.4 260,851 + B158DRAFT_0254 0.74 -0.7 260,869 + B158DRAFT_0254 0.75 +2.1 260,888 + B158DRAFT_0254 0.77 +1.5 260,896 - B158DRAFT_0254 0.78 +1.6 260,923 + B158DRAFT_0254 0.80 +0.8 260,942 + B158DRAFT_0254 0.81 +1.9 260,947 + B158DRAFT_0254 0.82 +2.2 260,965 - B158DRAFT_0254 0.83 +1.6 261,033 - B158DRAFT_0254 0.88 +1.3 261,038 - B158DRAFT_0254 0.89 +1.8 261,038 - B158DRAFT_0254 0.89 -0.0 261,112 + +1.3 261,118 - +0.8 261,161 + +0.6 261,161 + +2.5 261,161 + +0.9 261,161 + -0.2 261,161 + +1.9 261,161 + +1.1 261,161 + +0.3 261,161 + +2.1 261,164 + +1.8 261,169 - +0.9 261,169 - +2.5 261,169 - -0.8 261,169 - +1.6 261,169 - +1.4 261,169 - +1.6 261,169 - +0.7 261,169 - +1.7 261,341 + B158DRAFT_0255 0.13 +0.4 261,349 - B158DRAFT_0255 0.14 +2.2 261,349 - B158DRAFT_0255 0.14 +1.7 261,358 - B158DRAFT_0255 0.15 +2.1 261,422 + B158DRAFT_0255 0.20 +1.2 261,422 + B158DRAFT_0255 0.20 +1.8 261,430 - B158DRAFT_0255 0.20 +1.8 261,464 + B158DRAFT_0255 0.23 +0.9 261,464 + B158DRAFT_0255 0.23 +0.9 261,464 + B158DRAFT_0255 0.23 +1.1 261,464 + B158DRAFT_0255 0.23 +0.7 261,464 + B158DRAFT_0255 0.23 +1.8 261,472 - B158DRAFT_0255 0.24 +0.5 261,472 - B158DRAFT_0255 0.24 +1.9 261,472 - B158DRAFT_0255 0.24 +0.4 261,500 + B158DRAFT_0255 0.26 +2.0 261,500 + B158DRAFT_0255 0.26 +1.1 261,500 + B158DRAFT_0255 0.26 +1.2 261,500 + B158DRAFT_0255 0.26 +1.1 261,508 - B158DRAFT_0255 0.27 +1.1 261,508 - B158DRAFT_0255 0.27 +1.1 261,508 - B158DRAFT_0255 0.27 +2.6 261,508 - B158DRAFT_0255 0.27 +1.2 261,523 + B158DRAFT_0255 0.28 +1.2 261,533 + B158DRAFT_0255 0.29 +0.6 261,562 + B158DRAFT_0255 0.31 -1.9 261,570 - B158DRAFT_0255 0.32 +1.6 261,575 - B158DRAFT_0255 0.32 +1.8 261,579 + B158DRAFT_0255 0.33 -0.5 261,640 + B158DRAFT_0255 0.37 +2.7 261,645 + B158DRAFT_0255 0.38 +0.7 261,658 - B158DRAFT_0255 0.39 +3.7 261,714 - B158DRAFT_0255 0.44 +0.7 261,784 + B158DRAFT_0255 0.49 -0.6 261,854 - B158DRAFT_0255 0.55 +0.4 261,915 + B158DRAFT_0255 0.60 +0.2 261,928 - B158DRAFT_0255 0.61 -0.5 261,928 - B158DRAFT_0255 0.61 +0.1 261,928 - B158DRAFT_0255 0.61 +1.4 261,954 - B158DRAFT_0255 0.63 +0.9 261,954 - B158DRAFT_0255 0.63 +1.6 261,954 - B158DRAFT_0255 0.63 +0.1 261,970 + B158DRAFT_0255 0.64 +0.1 261,970 + B158DRAFT_0255 0.64 +0.2 261,973 - B158DRAFT_0255 0.65 +1.4 261,978 - B158DRAFT_0255 0.65 +1.7 261,978 - B158DRAFT_0255 0.65 +2.5 261,978 - B158DRAFT_0255 0.65 -0.3 261,978 - B158DRAFT_0255 0.65 -0.4 261,978 - B158DRAFT_0255 0.65 -0.6 262,006 - B158DRAFT_0255 0.67 +1.1 262,034 + B158DRAFT_0255 0.70 +0.1 262,042 - B158DRAFT_0255 0.70 +3.1 262,157 - B158DRAFT_0255 0.80 -1.3 262,167 - B158DRAFT_0255 0.80 +1.1 262,169 + B158DRAFT_0255 0.81 -0.3 262,177 - B158DRAFT_0255 0.81 +1.8 262,177 - B158DRAFT_0255 0.81 +0.6 262,177 - B158DRAFT_0255 0.81 +0.1 262,189 - B158DRAFT_0255 0.82 -0.3 262,269 + B158DRAFT_0255 0.89 -0.5 262,269 - B158DRAFT_0255 0.89 -0.9 262,271 + B158DRAFT_0255 0.89 +2.7 262,276 + B158DRAFT_0255 0.89 +1.4 262,279 - B158DRAFT_0255 0.90 +1.5 262,306 + +1.4 262,488 + B158DRAFT_0256 0.15 +0.5 262,488 + B158DRAFT_0256 0.15 -1.4 262,496 - B158DRAFT_0256 0.18 -0.2 262,496 - B158DRAFT_0256 0.18 -1.0 262,575 - B158DRAFT_0256 0.52 +0.3 262,620 - B158DRAFT_0256 0.71 +0.2 262,620 - B158DRAFT_0256 0.71 -0.6 262,628 - B158DRAFT_0256 0.75 -1.0 262,628 - B158DRAFT_0256 0.75 -1.5 262,690 + +0.3 262,734 + -0.6 262,749 + +1.6 262,821 + -1.2 262,929 + +0.4 262,929 + -1.9 262,929 + -1.2 262,931 - -0.4 262,933 + -1.1 262,937 - +0.0 262,937 - -1.7 262,937 - -1.2 262,942 - -1.8 262,950 + -0.7 262,981 - +0.1 263,132 - B158DRAFT_0257 0.59 -0.8 263,132 - B158DRAFT_0257 0.59 +3.1 263,251 - -0.6 263,272 - -0.2 263,272 - -0.2 263,304 + -0.1 263,345 + +0.7 263,351 + -1.3 263,374 - +1.8 263,376 - -0.1
Or see this region's nucleotide sequence