Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0166 and B158DRAFT_0167 are separated by 17 nucleotides B158DRAFT_0167 and B158DRAFT_0168 are separated by 92 nucleotides
B158DRAFT_0166: B158DRAFT_0166 - IMP cyclohydrolase (EC 3.5.4.10)/phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3), at 162,601 to 164,166
_0166
B158DRAFT_0167: B158DRAFT_0167 - phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 164,184 to 165,467
_0167
B158DRAFT_0168: B158DRAFT_0168 - Dicarboxylate transport., at 165,560 to 168,199
_0168
Position (kb) 164
165
166 Strain fitness (log2 ratio) -2
-1
0
1
2 at 165.439 kb on + strand at 165.470 kb on - strand at 165.496 kb on + strand at 165.496 kb on + strand at 165.496 kb on + strand at 165.504 kb on - strand at 165.509 kb on - strand at 165.552 kb on + strand at 165.552 kb on + strand at 165.587 kb on + strand at 165.587 kb on + strand at 165.595 kb on - strand at 165.595 kb on - strand at 165.595 kb on - strand at 165.602 kb on + strand at 165.602 kb on + strand at 165.608 kb on - strand at 165.642 kb on - strand at 165.643 kb on + strand at 165.645 kb on + strand at 165.770 kb on + strand at 165.770 kb on + strand at 165.770 kb on + strand at 165.770 kb on + strand at 165.770 kb on + strand at 165.770 kb on + strand at 165.778 kb on - strand at 165.778 kb on - strand at 165.778 kb on - strand at 165.805 kb on + strand at 165.805 kb on + strand at 165.813 kb on - strand at 165.813 kb on - strand at 165.813 kb on - strand at 165.813 kb on - strand at 165.813 kb on - strand at 165.918 kb on + strand, within B158DRAFT_0168 at 165.962 kb on - strand, within B158DRAFT_0168 at 165.986 kb on + strand, within B158DRAFT_0168 at 165.986 kb on + strand, within B158DRAFT_0168 at 165.986 kb on + strand, within B158DRAFT_0168 at 165.991 kb on + strand, within B158DRAFT_0168 at 165.991 kb on + strand, within B158DRAFT_0168 at 165.994 kb on - strand, within B158DRAFT_0168 at 165.994 kb on - strand, within B158DRAFT_0168 at 165.999 kb on - strand, within B158DRAFT_0168 at 165.999 kb on - strand, within B158DRAFT_0168 at 165.999 kb on - strand, within B158DRAFT_0168 at 166.015 kb on + strand, within B158DRAFT_0168 at 166.015 kb on + strand, within B158DRAFT_0168 at 166.023 kb on - strand, within B158DRAFT_0168 at 166.031 kb on - strand, within B158DRAFT_0168 at 166.089 kb on - strand, within B158DRAFT_0168 at 166.117 kb on - strand, within B158DRAFT_0168 at 166.284 kb on + strand, within B158DRAFT_0168 at 166.319 kb on + strand, within B158DRAFT_0168 at 166.374 kb on + strand, within B158DRAFT_0168 at 166.384 kb on + strand, within B158DRAFT_0168 at 166.395 kb on - strand, within B158DRAFT_0168 at 166.413 kb on + strand, within B158DRAFT_0168 at 166.413 kb on + strand, within B158DRAFT_0168 at 166.414 kb on - strand, within B158DRAFT_0168 at 166.420 kb on - strand, within B158DRAFT_0168
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 165,439 + +2.1 165,470 - -1.3 165,496 + -0.8 165,496 + -0.8 165,496 + +1.4 165,504 - -2.1 165,509 - -0.6 165,552 + -1.7 165,552 + -0.2 165,587 + -0.8 165,587 + -0.5 165,595 - -0.1 165,595 - -0.2 165,595 - +0.3 165,602 + -0.6 165,602 + -0.4 165,608 - -1.0 165,642 - -0.5 165,643 + +0.1 165,645 + -0.5 165,770 + -0.5 165,770 + +0.2 165,770 + -1.4 165,770 + -0.7 165,770 + +0.6 165,770 + -0.4 165,778 - +1.5 165,778 - +0.4 165,778 - +0.7 165,805 + +0.7 165,805 + +0.4 165,813 - -0.4 165,813 - -2.1 165,813 - +2.0 165,813 - -0.5 165,813 - -0.2 165,918 + B158DRAFT_0168 0.14 -1.3 165,962 - B158DRAFT_0168 0.15 -0.1 165,986 + B158DRAFT_0168 0.16 -0.3 165,986 + B158DRAFT_0168 0.16 -1.3 165,986 + B158DRAFT_0168 0.16 -0.3 165,991 + B158DRAFT_0168 0.16 -0.8 165,991 + B158DRAFT_0168 0.16 +1.3 165,994 - B158DRAFT_0168 0.16 +0.7 165,994 - B158DRAFT_0168 0.16 -0.9 165,999 - B158DRAFT_0168 0.17 -1.6 165,999 - B158DRAFT_0168 0.17 +0.5 165,999 - B158DRAFT_0168 0.17 -0.5 166,015 + B158DRAFT_0168 0.17 -1.6 166,015 + B158DRAFT_0168 0.17 -0.4 166,023 - B158DRAFT_0168 0.18 +2.4 166,031 - B158DRAFT_0168 0.18 +1.7 166,089 - B158DRAFT_0168 0.20 -0.9 166,117 - B158DRAFT_0168 0.21 -1.8 166,284 + B158DRAFT_0168 0.27 -1.1 166,319 + B158DRAFT_0168 0.29 +1.0 166,374 + B158DRAFT_0168 0.31 -1.2 166,384 + B158DRAFT_0168 0.31 -0.4 166,395 - B158DRAFT_0168 0.32 -0.7 166,413 + B158DRAFT_0168 0.32 -1.7 166,413 + B158DRAFT_0168 0.32 +2.4 166,414 - B158DRAFT_0168 0.32 +0.0 166,420 - B158DRAFT_0168 0.33 -0.6
Or see this region's nucleotide sequence