Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0100 and B158DRAFT_0101 are separated by 195 nucleotides B158DRAFT_0101 and B158DRAFT_0102 are separated by 728 nucleotides
B158DRAFT_0100: B158DRAFT_0100 - Na+/proline symporter, at 93,960 to 95,360
_0100
B158DRAFT_0101: B158DRAFT_0101 - YceI-like domain., at 95,556 to 96,170
_0101
B158DRAFT_0102: B158DRAFT_0102 - hypothetical protein, at 96,899 to 97,384
_0102
Position (kb)
95
96
97 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 94.558 kb on + strand, within B158DRAFT_0100 at 94.566 kb on - strand, within B158DRAFT_0100 at 94.576 kb on - strand, within B158DRAFT_0100 at 94.583 kb on + strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.591 kb on - strand, within B158DRAFT_0100 at 94.601 kb on + strand, within B158DRAFT_0100 at 94.626 kb on - strand, within B158DRAFT_0100 at 94.630 kb on - strand, within B158DRAFT_0100 at 94.707 kb on - strand, within B158DRAFT_0100 at 94.733 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.743 kb on + strand, within B158DRAFT_0100 at 94.751 kb on - strand, within B158DRAFT_0100 at 94.818 kb on + strand, within B158DRAFT_0100 at 94.829 kb on + strand, within B158DRAFT_0100 at 94.829 kb on + strand, within B158DRAFT_0100 at 94.841 kb on - strand, within B158DRAFT_0100 at 94.951 kb on + strand, within B158DRAFT_0100 at 94.951 kb on + strand, within B158DRAFT_0100 at 94.951 kb on + strand, within B158DRAFT_0100 at 94.951 kb on + strand, within B158DRAFT_0100 at 94.964 kb on - strand, within B158DRAFT_0100 at 94.969 kb on + strand, within B158DRAFT_0100 at 94.977 kb on - strand, within B158DRAFT_0100 at 94.977 kb on - strand, within B158DRAFT_0100 at 94.985 kb on - strand, within B158DRAFT_0100 at 95.029 kb on - strand, within B158DRAFT_0100 at 95.034 kb on - strand, within B158DRAFT_0100 at 95.040 kb on + strand, within B158DRAFT_0100 at 95.048 kb on + strand, within B158DRAFT_0100 at 95.064 kb on - strand, within B158DRAFT_0100 at 95.064 kb on - strand, within B158DRAFT_0100 at 95.117 kb on + strand, within B158DRAFT_0100 at 95.177 kb on - strand, within B158DRAFT_0100 at 95.291 kb on - strand at 95.370 kb on + strand at 95.377 kb on - strand at 95.380 kb on + strand at 95.399 kb on + strand at 95.407 kb on - strand at 95.607 kb on + strand at 95.610 kb on + strand at 95.610 kb on + strand at 95.612 kb on + strand at 95.676 kb on - strand, within B158DRAFT_0101 at 95.681 kb on - strand, within B158DRAFT_0101 at 95.689 kb on - strand, within B158DRAFT_0101 at 95.709 kb on + strand, within B158DRAFT_0101 at 95.714 kb on + strand, within B158DRAFT_0101 at 95.722 kb on - strand, within B158DRAFT_0101 at 95.722 kb on - strand, within B158DRAFT_0101 at 95.817 kb on - strand, within B158DRAFT_0101 at 95.991 kb on + strand, within B158DRAFT_0101 at 96.058 kb on + strand, within B158DRAFT_0101 at 96.058 kb on + strand, within B158DRAFT_0101 at 96.058 kb on + strand, within B158DRAFT_0101 at 96.066 kb on - strand, within B158DRAFT_0101 at 96.066 kb on - strand, within B158DRAFT_0101 at 96.066 kb on - strand, within B158DRAFT_0101 at 96.403 kb on - strand at 96.403 kb on - strand at 96.403 kb on - strand at 96.403 kb on - strand at 96.436 kb on + strand at 96.456 kb on + strand at 96.482 kb on + strand at 96.482 kb on + strand at 96.490 kb on - strand at 96.596 kb on + strand at 96.682 kb on + strand at 96.734 kb on - strand at 96.744 kb on - strand at 96.764 kb on + strand at 96.764 kb on + strand at 96.771 kb on - strand at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.056 kb on + strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.064 kb on - strand, within B158DRAFT_0102 at 97.125 kb on + strand, within B158DRAFT_0102 at 97.130 kb on + strand at 97.158 kb on - strand, within B158DRAFT_0102 at 97.158 kb on - strand, within B158DRAFT_0102
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 94,558 + B158DRAFT_0100 0.43 -0.2 94,566 - B158DRAFT_0100 0.43 +1.9 94,576 - B158DRAFT_0100 0.44 +0.3 94,583 + B158DRAFT_0100 0.44 +0.6 94,591 - B158DRAFT_0100 0.45 +0.0 94,591 - B158DRAFT_0100 0.45 -0.9 94,591 - B158DRAFT_0100 0.45 +0.1 94,591 - B158DRAFT_0100 0.45 +0.9 94,601 + B158DRAFT_0100 0.46 -1.3 94,626 - B158DRAFT_0100 0.48 -1.6 94,630 - B158DRAFT_0100 0.48 -1.4 94,707 - B158DRAFT_0100 0.53 -0.7 94,733 + B158DRAFT_0100 0.55 -0.5 94,743 + B158DRAFT_0100 0.56 +0.3 94,743 + B158DRAFT_0100 0.56 -0.3 94,743 + B158DRAFT_0100 0.56 +1.3 94,743 + B158DRAFT_0100 0.56 +0.4 94,743 + B158DRAFT_0100 0.56 +1.1 94,743 + B158DRAFT_0100 0.56 -2.4 94,743 + B158DRAFT_0100 0.56 -0.6 94,743 + B158DRAFT_0100 0.56 -1.5 94,751 - B158DRAFT_0100 0.56 -1.0 94,818 + B158DRAFT_0100 0.61 -0.0 94,829 + B158DRAFT_0100 0.62 -1.1 94,829 + B158DRAFT_0100 0.62 -1.3 94,841 - B158DRAFT_0100 0.63 -1.0 94,951 + B158DRAFT_0100 0.71 -0.9 94,951 + B158DRAFT_0100 0.71 -2.4 94,951 + B158DRAFT_0100 0.71 -0.8 94,951 + B158DRAFT_0100 0.71 -0.9 94,964 - B158DRAFT_0100 0.72 -0.7 94,969 + B158DRAFT_0100 0.72 -1.7 94,977 - B158DRAFT_0100 0.73 -1.4 94,977 - B158DRAFT_0100 0.73 -0.9 94,985 - B158DRAFT_0100 0.73 -1.1 95,029 - B158DRAFT_0100 0.76 +1.2 95,034 - B158DRAFT_0100 0.77 +1.3 95,040 + B158DRAFT_0100 0.77 -0.8 95,048 + B158DRAFT_0100 0.78 +0.7 95,064 - B158DRAFT_0100 0.79 +0.7 95,064 - B158DRAFT_0100 0.79 +0.8 95,117 + B158DRAFT_0100 0.83 -0.4 95,177 - B158DRAFT_0100 0.87 -1.8 95,291 - +0.3 95,370 + +0.6 95,377 - -1.9 95,380 + -0.2 95,399 + -1.6 95,407 - -0.5 95,607 + -0.6 95,610 + +1.3 95,610 + -0.1 95,612 + -0.3 95,676 - B158DRAFT_0101 0.20 +1.2 95,681 - B158DRAFT_0101 0.20 +1.0 95,689 - B158DRAFT_0101 0.22 -0.4 95,709 + B158DRAFT_0101 0.25 -1.3 95,714 + B158DRAFT_0101 0.26 +1.4 95,722 - B158DRAFT_0101 0.27 +0.5 95,722 - B158DRAFT_0101 0.27 -0.6 95,817 - B158DRAFT_0101 0.42 -0.3 95,991 + B158DRAFT_0101 0.71 -1.2 96,058 + B158DRAFT_0101 0.82 +0.7 96,058 + B158DRAFT_0101 0.82 +0.2 96,058 + B158DRAFT_0101 0.82 -0.3 96,066 - B158DRAFT_0101 0.83 -1.3 96,066 - B158DRAFT_0101 0.83 -0.8 96,066 - B158DRAFT_0101 0.83 -2.4 96,403 - +0.6 96,403 - +2.1 96,403 - -0.9 96,403 - -0.4 96,436 + -1.6 96,456 + -0.4 96,482 + -1.7 96,482 + -0.5 96,490 - -0.9 96,596 + -1.5 96,682 + +0.6 96,734 - -2.7 96,744 - -0.2 96,764 + -0.9 96,764 + +0.1 96,771 - -0.6 97,056 + B158DRAFT_0102 0.32 -0.5 97,056 + B158DRAFT_0102 0.32 -1.2 97,056 + B158DRAFT_0102 0.32 +0.1 97,056 + B158DRAFT_0102 0.32 -0.2 97,056 + B158DRAFT_0102 0.32 -1.4 97,056 + B158DRAFT_0102 0.32 -0.9 97,056 + B158DRAFT_0102 0.32 -0.1 97,056 + B158DRAFT_0102 0.32 -0.4 97,064 - B158DRAFT_0102 0.34 +2.6 97,064 - B158DRAFT_0102 0.34 -0.3 97,064 - B158DRAFT_0102 0.34 -1.2 97,064 - B158DRAFT_0102 0.34 -2.1 97,064 - B158DRAFT_0102 0.34 -0.6 97,064 - B158DRAFT_0102 0.34 +0.5 97,064 - B158DRAFT_0102 0.34 -0.1 97,064 - B158DRAFT_0102 0.34 -2.4 97,064 - B158DRAFT_0102 0.34 +0.6 97,064 - B158DRAFT_0102 0.34 -0.7 97,064 - B158DRAFT_0102 0.34 -1.7 97,125 + B158DRAFT_0102 0.47 +0.1 97,130 + +3.4 97,158 - B158DRAFT_0102 0.53 -0.7 97,158 - B158DRAFT_0102 0.53 -0.6
Or see this region's nucleotide sequence