Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0037

Experiment: m.b. nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0036 and B158DRAFT_0037 are separated by 67 nucleotidesB158DRAFT_0037 and B158DRAFT_0038 are separated by 23 nucleotides B158DRAFT_0036: B158DRAFT_0036 - Predicted aminopeptidases, at 35,347 to 36,393 _0036 B158DRAFT_0037: B158DRAFT_0037 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 36,461 to 36,889 _0037 B158DRAFT_0038: B158DRAFT_0038 - penicillin-binding protein 1B, at 36,913 to 39,234 _0038 Position (kb) 36 37Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 35.466 kb on - strand, within B158DRAFT_0036at 35.516 kb on + strand, within B158DRAFT_0036at 35.540 kb on - strand, within B158DRAFT_0036at 35.579 kb on + strand, within B158DRAFT_0036at 35.622 kb on + strand, within B158DRAFT_0036at 35.622 kb on + strand, within B158DRAFT_0036at 35.622 kb on + strand, within B158DRAFT_0036at 35.622 kb on + strand, within B158DRAFT_0036at 35.630 kb on - strand, within B158DRAFT_0036at 35.630 kb on - strand, within B158DRAFT_0036at 35.630 kb on - strand, within B158DRAFT_0036at 35.630 kb on - strand, within B158DRAFT_0036at 35.725 kb on + strand, within B158DRAFT_0036at 35.725 kb on + strand, within B158DRAFT_0036at 35.725 kb on + strand, within B158DRAFT_0036at 35.726 kb on + strand, within B158DRAFT_0036at 35.733 kb on - strand, within B158DRAFT_0036at 35.738 kb on - strand, within B158DRAFT_0036at 35.763 kb on - strand, within B158DRAFT_0036at 35.974 kb on + strand, within B158DRAFT_0036at 35.974 kb on + strand, within B158DRAFT_0036at 35.974 kb on + strand, within B158DRAFT_0036at 35.985 kb on + strand, within B158DRAFT_0036at 35.985 kb on + strand, within B158DRAFT_0036at 35.985 kb on + strand, within B158DRAFT_0036at 35.993 kb on - strand, within B158DRAFT_0036at 35.993 kb on - strand, within B158DRAFT_0036at 36.097 kb on + strand, within B158DRAFT_0036at 36.235 kb on - strand, within B158DRAFT_0036at 36.342 kb on + strandat 36.466 kb on - strandat 36.571 kb on + strand, within B158DRAFT_0037at 36.571 kb on + strand, within B158DRAFT_0037at 36.579 kb on - strand, within B158DRAFT_0037at 36.579 kb on - strand, within B158DRAFT_0037at 36.717 kb on - strand, within B158DRAFT_0037at 36.725 kb on - strand, within B158DRAFT_0037at 36.789 kb on - strand, within B158DRAFT_0037at 36.792 kb on + strand, within B158DRAFT_0037at 36.844 kb on + strand, within B158DRAFT_0037at 36.844 kb on + strand, within B158DRAFT_0037at 36.844 kb on + strand, within B158DRAFT_0037at 36.849 kb on + strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.862 kb on - strandat 36.867 kb on - strandat 36.875 kb on - strandat 36.885 kb on - strandat 36.904 kb on + strandat 36.957 kb on + strandat 36.965 kb on - strandat 37.082 kb on + strandat 37.082 kb on + strandat 37.082 kb on + strandat 37.082 kb on + strandat 37.082 kb on + strandat 37.090 kb on - strandat 37.090 kb on - strandat 37.090 kb on - strandat 37.090 kb on - strandat 37.169 kb on + strand, within B158DRAFT_0038at 37.169 kb on + strand, within B158DRAFT_0038at 37.169 kb on + strand, within B158DRAFT_0038at 37.180 kb on + strand, within B158DRAFT_0038at 37.198 kb on - strand, within B158DRAFT_0038at 37.297 kb on - strand, within B158DRAFT_0038at 37.299 kb on + strand, within B158DRAFT_0038at 37.299 kb on + strand, within B158DRAFT_0038at 37.322 kb on + strand, within B158DRAFT_0038at 37.322 kb on + strand, within B158DRAFT_0038at 37.322 kb on + strand, within B158DRAFT_0038at 37.322 kb on + strand, within B158DRAFT_0038at 37.330 kb on - strand, within B158DRAFT_0038at 37.330 kb on - strand, within B158DRAFT_0038at 37.418 kb on - strand, within B158DRAFT_0038at 37.559 kb on + strand, within B158DRAFT_0038at 37.629 kb on + strand, within B158DRAFT_0038at 37.637 kb on - strand, within B158DRAFT_0038at 37.781 kb on + strand, within B158DRAFT_0038at 37.858 kb on - strand, within B158DRAFT_0038

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM
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35,466 - B158DRAFT_0036 0.11 -0.0
35,516 + B158DRAFT_0036 0.16 +0.8
35,540 - B158DRAFT_0036 0.18 -0.7
35,579 + B158DRAFT_0036 0.22 -1.4
35,622 + B158DRAFT_0036 0.26 -0.6
35,622 + B158DRAFT_0036 0.26 +0.3
35,622 + B158DRAFT_0036 0.26 +0.2
35,622 + B158DRAFT_0036 0.26 +0.7
35,630 - B158DRAFT_0036 0.27 -1.1
35,630 - B158DRAFT_0036 0.27 -0.8
35,630 - B158DRAFT_0036 0.27 -1.0
35,630 - B158DRAFT_0036 0.27 -1.0
35,725 + B158DRAFT_0036 0.36 -0.7
35,725 + B158DRAFT_0036 0.36 -0.4
35,725 + B158DRAFT_0036 0.36 -1.1
35,726 + B158DRAFT_0036 0.36 -0.3
35,733 - B158DRAFT_0036 0.37 +0.5
35,738 - B158DRAFT_0036 0.37 -0.9
35,763 - B158DRAFT_0036 0.40 -0.6
35,974 + B158DRAFT_0036 0.60 -2.0
35,974 + B158DRAFT_0036 0.60 -1.4
35,974 + B158DRAFT_0036 0.60 +0.1
35,985 + B158DRAFT_0036 0.61 +0.2
35,985 + B158DRAFT_0036 0.61 -0.6
35,985 + B158DRAFT_0036 0.61 -0.9
35,993 - B158DRAFT_0036 0.62 +0.7
35,993 - B158DRAFT_0036 0.62 -1.4
36,097 + B158DRAFT_0036 0.72 -0.7
36,235 - B158DRAFT_0036 0.85 -0.6
36,342 + -1.9
36,466 - -1.3
36,571 + B158DRAFT_0037 0.26 -0.9
36,571 + B158DRAFT_0037 0.26 -0.5
36,579 - B158DRAFT_0037 0.28 -1.3
36,579 - B158DRAFT_0037 0.28 -3.3
36,717 - B158DRAFT_0037 0.60 -1.4
36,725 - B158DRAFT_0037 0.62 -0.1
36,789 - B158DRAFT_0037 0.76 -0.9
36,792 + B158DRAFT_0037 0.77 -0.4
36,844 + B158DRAFT_0037 0.89 -1.9
36,844 + B158DRAFT_0037 0.89 -1.1
36,844 + B158DRAFT_0037 0.89 -0.5
36,849 + -0.3
36,852 - -3.3
36,852 - -1.4
36,852 - +0.2
36,852 - -1.0
36,852 - -0.8
36,852 - -0.2
36,862 - -1.0
36,867 - -1.2
36,875 - -1.0
36,885 - -1.1
36,904 + +0.0
36,957 + -1.4
36,965 - -2.0
37,082 + -2.4
37,082 + -0.4
37,082 + +0.7
37,082 + -0.8
37,082 + -0.4
37,090 - -1.3
37,090 - -1.1
37,090 - +2.1
37,090 - -1.0
37,169 + B158DRAFT_0038 0.11 -0.8
37,169 + B158DRAFT_0038 0.11 -0.7
37,169 + B158DRAFT_0038 0.11 -1.2
37,180 + B158DRAFT_0038 0.11 -1.6
37,198 - B158DRAFT_0038 0.12 +0.4
37,297 - B158DRAFT_0038 0.17 -1.5
37,299 + B158DRAFT_0038 0.17 -2.7
37,299 + B158DRAFT_0038 0.17 -0.6
37,322 + B158DRAFT_0038 0.18 -1.2
37,322 + B158DRAFT_0038 0.18 -0.5
37,322 + B158DRAFT_0038 0.18 +1.3
37,322 + B158DRAFT_0038 0.18 -1.2
37,330 - B158DRAFT_0038 0.18 -0.9
37,330 - B158DRAFT_0038 0.18 +0.0
37,418 - B158DRAFT_0038 0.22 -0.5
37,559 + B158DRAFT_0038 0.28 -0.5
37,629 + B158DRAFT_0038 0.31 -1.2
37,637 - B158DRAFT_0038 0.31 -0.3
37,781 + B158DRAFT_0038 0.37 -1.1
37,858 - B158DRAFT_0038 0.41 -1.8

Or see this region's nucleotide sequence