Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0019 and B158DRAFT_0020 are separated by 66 nucleotides B158DRAFT_0020 and B158DRAFT_0021 are separated by 123 nucleotides B158DRAFT_0021 and B158DRAFT_0022 are separated by 35 nucleotides
B158DRAFT_0019: B158DRAFT_0019 - Protein of unknown function (DUF3037)., at 17,516 to 18,355
_0019
B158DRAFT_0020: B158DRAFT_0020 - Rubredoxin, at 18,422 to 18,610
_0020
B158DRAFT_0021: B158DRAFT_0021 - aspartate carbamoyltransferase (EC 2.1.3.2), at 18,734 to 19,795
_0021
B158DRAFT_0022: B158DRAFT_0022 - glutamate-1-semialdehyde-2,1-aminomutase, at 19,831 to 21,105
_0022
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1
2 at 18.421 kb on + strand at 18.499 kb on - strand, within B158DRAFT_0020 at 18.499 kb on - strand, within B158DRAFT_0020 at 18.499 kb on - strand, within B158DRAFT_0020 at 18.499 kb on - strand, within B158DRAFT_0020 at 18.499 kb on - strand, within B158DRAFT_0020 at 18.544 kb on + strand, within B158DRAFT_0020 at 18.551 kb on + strand, within B158DRAFT_0020 at 18.552 kb on - strand, within B158DRAFT_0020 at 18.612 kb on + strand at 18.612 kb on + strand at 19.828 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 18,421 + +1.8 18,499 - B158DRAFT_0020 0.41 -0.7 18,499 - B158DRAFT_0020 0.41 +0.5 18,499 - B158DRAFT_0020 0.41 -0.1 18,499 - B158DRAFT_0020 0.41 +0.8 18,499 - B158DRAFT_0020 0.41 -1.0 18,544 + B158DRAFT_0020 0.65 -0.3 18,551 + B158DRAFT_0020 0.68 -1.8 18,552 - B158DRAFT_0020 0.69 +0.7 18,612 + +0.0 18,612 + -0.1 19,828 + +1.9
Or see this region's nucleotide sequence