Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18320 and PS417_18325 are separated by 26 nucleotides PS417_18325 and PS417_18330 are separated by 108 nucleotides PS417_18330 and PS417_18335 are separated by 30 nucleotides PS417_18335 and PS417_18340 are separated by 60 nucleotides
PS417_18320: PS417_18320 - phenylalanyl-tRNA synthetase, at 3,991,627 to 3,994,005
_18320
PS417_18325: PS417_18325 - phenylalanyl-tRNA synthetase, at 3,994,032 to 3,995,048
_18325
PS417_18330: PS417_18330 - 50S ribosomal protein L20, at 3,995,157 to 3,995,513
_18330
PS417_18335: PS417_18335 - 50S ribosomal protein L35, at 3,995,544 to 3,995,738
_18335
PS417_18340: PS417_18340 - translation initiation factor IF-3, at 3,995,799 to 3,996,332
_18340
Position (kb)
3994
3995
3996 Strain fitness (log2 ratio)
-1
0
1 at 3995.064 kb on - strand at 3995.103 kb on - strand at 3995.103 kb on - strand at 3995.103 kb on - strand at 3995.103 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 3,995,064 - +0.4 3,995,103 - -0.6 3,995,103 - -0.4 3,995,103 - +0.6 3,995,103 - -0.9
Or see this region's nucleotide sequence