Strain Fitness in Escherichia coli BW25113 around b1295
Experiment: P2 dilution 10-3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | P2 dilution 10-3 |
|---|---|---|---|---|---|
| remove | |||||
| 1,354,486 | - | sapA | b1294 | 0.61 | -0.8 |
| 1,354,486 | - | sapA | b1294 | 0.61 | -0.8 |
| 1,354,640 | + | sapA | b1294 | 0.70 | -1.9 |
| 1,354,789 | - | sapA | b1294 | 0.79 | -0.1 |
| 1,354,915 | - | sapA | b1294 | 0.87 | -1.6 |
| 1,354,915 | - | sapA | b1294 | 0.87 | +1.1 |
| 1,354,998 | - | -1.1 | |||
| 1,355,215 | + | +0.3 | |||
| 1,355,225 | - | -0.2 | |||
| 1,355,225 | - | +0.1 | |||
| 1,355,370 | - | -0.4 | |||
| 1,355,370 | - | +1.6 | |||
| 1,355,445 | - | -0.4 | |||
| 1,355,485 | + | ymjA | b1295 | 0.15 | -0.8 |
| 1,355,488 | - | ymjA | b1295 | 0.17 | -3.1 |
| 1,355,488 | - | ymjA | b1295 | 0.17 | -0.6 |
| 1,355,507 | - | ymjA | b1295 | 0.24 | +0.8 |
| 1,355,713 | - | +0.6 | |||
| 1,355,723 | - | +0.4 | |||
| 1,355,726 | - | +0.4 | |||
| 1,355,728 | - | +0.6 | |||
| 1,355,853 | - | -0.7 | |||
| 1,355,862 | + | -0.1 | |||
| 1,356,256 | + | ycjJ | b1296 | 0.31 | -0.3 |
Or see this region's nucleotide sequence