Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_20795 and PS417_20800 are separated by 132 nucleotides
PS417_20795: PS417_20795 - acyl-CoA dehydrogenase, at 4,517,086 to 4,518,234
_20795
PS417_20800: PS417_20800 - recombination protein RecR, at 4,518,367 to 4,518,969
_20800
Position (kb) 4518
4519 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4517.647 kb on - strand, within PS417_20795 at 4517.726 kb on + strand, within PS417_20795 at 4518.101 kb on + strand, within PS417_20795 at 4518.215 kb on + strand at 4518.215 kb on + strand at 4518.216 kb on - strand at 4518.369 kb on - strand at 4518.369 kb on - strand at 4518.506 kb on + strand, within PS417_20800 at 4518.506 kb on + strand, within PS417_20800 at 4518.506 kb on + strand, within PS417_20800 at 4518.506 kb on + strand, within PS417_20800 at 4518.506 kb on + strand, within PS417_20800 at 4518.506 kb on + strand, within PS417_20800 at 4518.507 kb on - strand, within PS417_20800 at 4518.507 kb on - strand, within PS417_20800 at 4518.507 kb on - strand, within PS417_20800 at 4518.507 kb on - strand, within PS417_20800 at 4518.562 kb on - strand, within PS417_20800 at 4518.662 kb on + strand, within PS417_20800 at 4518.695 kb on + strand, within PS417_20800 at 4518.696 kb on - strand, within PS417_20800 at 4519.070 kb on + strand at 4519.071 kb on - strand at 4519.296 kb on + strand at 4519.389 kb on + strand at 4519.389 kb on + strand at 4519.389 kb on + strand at 4519.390 kb on - strand at 4519.390 kb on - strand at 4519.390 kb on - strand at 4519.390 kb on - strand at 4519.390 kb on - strand at 4519.390 kb on - strand at 4519.393 kb on + strand at 4519.393 kb on + strand at 4519.394 kb on - strand at 4519.481 kb on + strand at 4519.481 kb on + strand at 4519.481 kb on + strand at 4519.481 kb on + strand at 4519.482 kb on - strand at 4519.482 kb on - strand at 4519.641 kb on + strand at 4519.642 kb on - strand at 4519.642 kb on - strand at 4519.836 kb on - strand at 4519.863 kb on + strand at 4519.897 kb on - strand at 4519.914 kb on + strand at 4519.915 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,517,647 - PS417_20795 0.49 -0.3 4,517,726 + PS417_20795 0.56 +1.3 4,518,101 + PS417_20795 0.88 -1.9 4,518,215 + +1.5 4,518,215 + -0.7 4,518,216 - +0.6 4,518,369 - +0.6 4,518,369 - -3.0 4,518,506 + PS417_20800 0.23 -2.6 4,518,506 + PS417_20800 0.23 -0.4 4,518,506 + PS417_20800 0.23 -2.5 4,518,506 + PS417_20800 0.23 +1.3 4,518,506 + PS417_20800 0.23 +0.2 4,518,506 + PS417_20800 0.23 -0.4 4,518,507 - PS417_20800 0.23 -1.1 4,518,507 - PS417_20800 0.23 -0.3 4,518,507 - PS417_20800 0.23 -2.8 4,518,507 - PS417_20800 0.23 -0.1 4,518,562 - PS417_20800 0.32 -0.3 4,518,662 + PS417_20800 0.49 -0.8 4,518,695 + PS417_20800 0.54 -1.0 4,518,696 - PS417_20800 0.55 -0.3 4,519,070 + +0.8 4,519,071 - -3.4 4,519,296 + -1.4 4,519,389 + -0.9 4,519,389 + -0.5 4,519,389 + +0.2 4,519,390 - -1.1 4,519,390 - +2.8 4,519,390 - +0.5 4,519,390 - -1.1 4,519,390 - -0.5 4,519,390 - +0.7 4,519,393 + +0.0 4,519,393 + +1.1 4,519,394 - -0.4 4,519,481 + +0.5 4,519,481 + -0.7 4,519,481 + +0.8 4,519,481 + +0.7 4,519,482 - -0.6 4,519,482 - -1.3 4,519,641 + -2.0 4,519,642 - -0.5 4,519,642 - +1.6 4,519,836 - +1.5 4,519,863 + +1.0 4,519,897 - +0.1 4,519,914 + -1.6 4,519,915 - -2.0
Or see this region's nucleotide sequence