Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06310 and PS417_06315 are separated by 184 nucleotides PS417_06315 and PS417_06320 overlap by 4 nucleotides PS417_06320 and PS417_06325 are separated by 129 nucleotides
PS417_06310: PS417_06310 - enolase, at 1,402,507 to 1,403,796
_06310
PS417_06315: PS417_06315 - cell division protein FtsB, at 1,403,981 to 1,404,259
_06315
PS417_06320: PS417_06320 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,404,256 to 1,404,963
_06320
PS417_06325: PS417_06325 - LysR family transcriptional regulator, at 1,405,093 to 1,405,989
_06325
Position (kb)
1404
1405 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1403.767 kb on + strand at 1403.767 kb on + strand at 1403.874 kb on + strand at 1405.127 kb on - strand at 1405.184 kb on + strand, within PS417_06325 at 1405.268 kb on + strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.272 kb on - strand, within PS417_06325 at 1405.422 kb on + strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.447 kb on - strand, within PS417_06325 at 1405.472 kb on + strand, within PS417_06325 at 1405.493 kb on + strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 1,403,767 + -2.1 1,403,767 + -1.4 1,403,874 + +1.8 1,405,127 - +1.0 1,405,184 + PS417_06325 0.10 +1.0 1,405,268 + PS417_06325 0.20 +0.3 1,405,269 - PS417_06325 0.20 -0.3 1,405,269 - PS417_06325 0.20 +0.5 1,405,269 - PS417_06325 0.20 +0.5 1,405,271 + PS417_06325 0.20 +1.0 1,405,271 + PS417_06325 0.20 -1.3 1,405,272 - PS417_06325 0.20 +3.0 1,405,422 + PS417_06325 0.37 -0.0 1,405,423 - PS417_06325 0.37 -1.0 1,405,423 - PS417_06325 0.37 +1.5 1,405,446 + PS417_06325 0.39 +2.1 1,405,446 + PS417_06325 0.39 -1.1 1,405,447 - PS417_06325 0.39 -1.0 1,405,472 + PS417_06325 0.42 +0.2 1,405,493 + PS417_06325 0.45 +0.0 1,405,494 - PS417_06325 0.45 +0.8 1,405,494 - PS417_06325 0.45 -0.7 1,405,494 - PS417_06325 0.45 -1.6
Or see this region's nucleotide sequence