Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26800 and PS417_26805 overlap by 4 nucleotides PS417_26805 and PS417_26810 overlap by 4 nucleotides PS417_26810 and PS417_26815 are separated by 232 nucleotides
PS417_26800: PS417_26800 - cell division protein FtsX, at 5,786,781 to 5,787,806
_26800
PS417_26805: PS417_26805 - cell division protein FtsE, at 5,787,803 to 5,788,474
_26805
PS417_26810: PS417_26810 - cell division protein FtsY, at 5,788,471 to 5,789,856
_26810
PS417_26815: PS417_26815 - peptidase M16, at 5,790,089 to 5,791,444
_26815
Position (kb)
5788
5789
5790 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 5787.494 kb on - strand, within PS417_26800 at 5787.546 kb on - strand, within PS417_26800 at 5787.785 kb on + strand at 5787.806 kb on + strand at 5788.376 kb on + strand, within PS417_26805 at 5788.444 kb on - strand at 5788.444 kb on - strand at 5789.921 kb on - strand at 5789.965 kb on - strand at 5790.029 kb on - strand at 5790.261 kb on - strand, within PS417_26815 at 5790.432 kb on - strand, within PS417_26815 at 5790.786 kb on - strand, within PS417_26815
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 5,787,494 - PS417_26800 0.69 +0.8 5,787,546 - PS417_26800 0.75 -0.7 5,787,785 + -0.0 5,787,806 + +4.9 5,788,376 + PS417_26805 0.85 +1.7 5,788,444 - +0.5 5,788,444 - +1.5 5,789,921 - +0.2 5,789,965 - -1.8 5,790,029 - -1.2 5,790,261 - PS417_26815 0.13 +0.2 5,790,432 - PS417_26815 0.25 +0.9 5,790,786 - PS417_26815 0.51 -1.0
Or see this region's nucleotide sequence