Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19040 and PS417_19045 overlap by 4 nucleotides
PS417_19040: PS417_19040 - aspartate racemase, at 4,120,051 to 4,121,502
_19040
PS417_19045: PS417_19045 - amino acid:proton symporter, at 4,121,499 to 4,122,761
_19045
Position (kb)
4121
4122
4123 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4120.641 kb on + strand, within PS417_19040 at 4120.641 kb on + strand, within PS417_19040 at 4120.648 kb on + strand, within PS417_19040 at 4120.649 kb on - strand, within PS417_19040 at 4120.993 kb on + strand, within PS417_19040 at 4121.009 kb on + strand, within PS417_19040 at 4121.009 kb on + strand, within PS417_19040 at 4121.010 kb on - strand, within PS417_19040 at 4121.010 kb on - strand, within PS417_19040 at 4121.306 kb on + strand, within PS417_19040 at 4121.306 kb on + strand, within PS417_19040 at 4121.306 kb on + strand, within PS417_19040 at 4121.788 kb on + strand, within PS417_19045 at 4121.788 kb on + strand, within PS417_19045 at 4121.825 kb on - strand, within PS417_19045 at 4122.147 kb on + strand, within PS417_19045 at 4122.148 kb on - strand, within PS417_19045 at 4122.175 kb on + strand, within PS417_19045 at 4122.233 kb on + strand, within PS417_19045 at 4122.234 kb on - strand, within PS417_19045 at 4122.234 kb on - strand, within PS417_19045 at 4122.236 kb on - strand, within PS417_19045 at 4122.423 kb on - strand, within PS417_19045 at 4122.734 kb on + strand at 4122.734 kb on + strand at 4122.790 kb on + strand at 4122.790 kb on + strand at 4122.790 kb on + strand at 4122.791 kb on - strand at 4122.791 kb on - strand at 4122.791 kb on - strand at 4122.791 kb on - strand at 4122.805 kb on - strand at 4122.904 kb on - strand at 4123.317 kb on + strand at 4123.317 kb on + strand at 4123.532 kb on - strand at 4123.746 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,120,641 + PS417_19040 0.41 -3.7 4,120,641 + PS417_19040 0.41 -1.1 4,120,648 + PS417_19040 0.41 +1.8 4,120,649 - PS417_19040 0.41 +0.2 4,120,993 + PS417_19040 0.65 -0.1 4,121,009 + PS417_19040 0.66 -1.2 4,121,009 + PS417_19040 0.66 -0.5 4,121,010 - PS417_19040 0.66 +0.2 4,121,010 - PS417_19040 0.66 +1.7 4,121,306 + PS417_19040 0.86 -0.2 4,121,306 + PS417_19040 0.86 -1.6 4,121,306 + PS417_19040 0.86 -2.7 4,121,788 + PS417_19045 0.23 -1.1 4,121,788 + PS417_19045 0.23 +0.4 4,121,825 - PS417_19045 0.26 +0.3 4,122,147 + PS417_19045 0.51 -0.8 4,122,148 - PS417_19045 0.51 +0.8 4,122,175 + PS417_19045 0.54 +0.3 4,122,233 + PS417_19045 0.58 -2.2 4,122,234 - PS417_19045 0.58 -0.2 4,122,234 - PS417_19045 0.58 -2.4 4,122,236 - PS417_19045 0.58 -3.0 4,122,423 - PS417_19045 0.73 -0.3 4,122,734 + -0.1 4,122,734 + -2.0 4,122,790 + +0.8 4,122,790 + -0.7 4,122,790 + +0.2 4,122,791 - +0.3 4,122,791 - -0.6 4,122,791 - +1.8 4,122,791 - -0.2 4,122,805 - +0.2 4,122,904 - -2.1 4,123,317 + -0.8 4,123,317 + +0.5 4,123,532 - -0.7 4,123,746 + +0.5
Or see this region's nucleotide sequence