Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15090 and PS417_15095 overlap by 4 nucleotides PS417_15095 and PS417_15100 overlap by 8 nucleotides PS417_15100 and PS417_15105 overlap by 4 nucleotides
PS417_15090: PS417_15090 - hypothetical protein, at 3,300,256 to 3,301,188
_15090
PS417_15095: PS417_15095 - hypothetical protein, at 3,301,185 to 3,301,679
_15095
PS417_15100: PS417_15100 - BatB protein, at 3,301,672 to 3,302,760
_15100
PS417_15105: PS417_15105 - membrane protein, at 3,302,757 to 3,304,496
_15105
Position (kb) 3301
3302
3303 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 3301.039 kb on + strand, within PS417_15090 at 3301.039 kb on + strand, within PS417_15090 at 3301.492 kb on - strand, within PS417_15095 at 3301.580 kb on - strand, within PS417_15095 at 3301.586 kb on - strand, within PS417_15095 at 3301.780 kb on + strand at 3302.108 kb on - strand, within PS417_15100 at 3302.350 kb on + strand, within PS417_15100 at 3302.473 kb on + strand, within PS417_15100 at 3303.121 kb on + strand, within PS417_15105 at 3303.121 kb on + strand, within PS417_15105 at 3303.121 kb on + strand, within PS417_15105 at 3303.121 kb on + strand, within PS417_15105 at 3303.122 kb on - strand, within PS417_15105 at 3303.122 kb on - strand at 3303.122 kb on - strand, within PS417_15105 at 3303.122 kb on - strand, within PS417_15105 at 3303.123 kb on + strand, within PS417_15105 at 3303.123 kb on + strand, within PS417_15105 at 3303.344 kb on - strand, within PS417_15105 at 3303.712 kb on + strand, within PS417_15105
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,301,039 + PS417_15090 0.84 +0.7 3,301,039 + PS417_15090 0.84 -2.6 3,301,492 - PS417_15095 0.62 -4.6 3,301,580 - PS417_15095 0.80 -2.2 3,301,586 - PS417_15095 0.81 -0.5 3,301,780 + -2.4 3,302,108 - PS417_15100 0.40 +2.1 3,302,350 + PS417_15100 0.62 -1.6 3,302,473 + PS417_15100 0.74 -3.6 3,303,121 + PS417_15105 0.21 -2.1 3,303,121 + PS417_15105 0.21 -0.1 3,303,121 + PS417_15105 0.21 +0.6 3,303,121 + PS417_15105 0.21 +3.3 3,303,122 - PS417_15105 0.21 -3.8 3,303,122 - -0.3 3,303,122 - PS417_15105 0.21 +0.9 3,303,122 - PS417_15105 0.21 -2.5 3,303,123 + PS417_15105 0.21 -0.4 3,303,123 + PS417_15105 0.21 -2.7 3,303,344 - PS417_15105 0.34 -1.9 3,303,712 + PS417_15105 0.55 -1.6
Or see this region's nucleotide sequence