Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14955 and PS417_14960 are separated by 2 nucleotides PS417_14960 and PS417_14965 are separated by 0 nucleotides PS417_14965 and PS417_14970 are separated by 156 nucleotides
PS417_14955: PS417_14955 - hypothetical protein, at 3,266,414 to 3,270,472
_14955
PS417_14960: PS417_14960 - ATPase, at 3,270,475 to 3,271,755
_14960
PS417_14965: PS417_14965 - transcriptional regulator, at 3,271,756 to 3,272,463
_14965
PS417_14970: PS417_14970 - MFS transporter, at 3,272,620 to 3,273,819
_14970
Position (kb)
3270
3271
3272 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3269.606 kb on + strand, within PS417_14955 at 3269.698 kb on + strand, within PS417_14955 at 3269.725 kb on - strand, within PS417_14955 at 3269.842 kb on - strand, within PS417_14955 at 3269.918 kb on - strand, within PS417_14955 at 3269.933 kb on + strand, within PS417_14955 at 3269.933 kb on + strand, within PS417_14955 at 3269.933 kb on + strand, within PS417_14955 at 3269.933 kb on + strand, within PS417_14955 at 3269.934 kb on - strand, within PS417_14955 at 3269.934 kb on - strand, within PS417_14955 at 3269.934 kb on - strand, within PS417_14955 at 3270.038 kb on + strand, within PS417_14955 at 3270.039 kb on - strand, within PS417_14955 at 3270.039 kb on - strand, within PS417_14955 at 3270.089 kb on - strand at 3270.105 kb on + strand at 3270.105 kb on + strand at 3270.321 kb on + strand at 3270.322 kb on - strand at 3270.336 kb on + strand at 3270.421 kb on + strand at 3270.423 kb on + strand at 3270.423 kb on + strand at 3270.423 kb on + strand at 3270.423 kb on + strand at 3270.423 kb on + strand at 3270.423 kb on + strand at 3270.423 kb on + strand at 3270.423 kb on + strand at 3270.424 kb on - strand at 3270.424 kb on - strand at 3270.424 kb on - strand at 3270.424 kb on - strand at 3270.424 kb on - strand at 3270.424 kb on - strand at 3270.447 kb on - strand at 3270.448 kb on + strand at 3270.489 kb on - strand at 3270.965 kb on + strand, within PS417_14960 at 3270.965 kb on + strand, within PS417_14960 at 3270.969 kb on + strand, within PS417_14960 at 3270.969 kb on + strand, within PS417_14960 at 3271.013 kb on + strand, within PS417_14960 at 3271.013 kb on + strand, within PS417_14960 at 3271.013 kb on + strand, within PS417_14960 at 3271.014 kb on - strand, within PS417_14960 at 3271.014 kb on - strand, within PS417_14960 at 3271.014 kb on - strand, within PS417_14960 at 3271.014 kb on - strand, within PS417_14960 at 3271.276 kb on - strand, within PS417_14960 at 3271.349 kb on + strand, within PS417_14960 at 3271.361 kb on + strand, within PS417_14960 at 3271.361 kb on + strand, within PS417_14960 at 3271.371 kb on + strand, within PS417_14960 at 3271.613 kb on + strand at 3271.613 kb on + strand, within PS417_14960 at 3271.614 kb on - strand, within PS417_14960 at 3271.683 kb on - strand at 3271.730 kb on + strand at 3271.730 kb on + strand at 3271.743 kb on - strand at 3271.757 kb on + strand at 3271.866 kb on - strand, within PS417_14965 at 3271.866 kb on - strand, within PS417_14965 at 3271.866 kb on - strand, within PS417_14965 at 3272.157 kb on - strand, within PS417_14965 at 3272.300 kb on - strand, within PS417_14965 at 3272.366 kb on - strand, within PS417_14965 at 3272.505 kb on + strand at 3272.505 kb on + strand at 3272.506 kb on - strand at 3272.506 kb on - strand at 3272.583 kb on + strand at 3272.620 kb on - strand at 3272.620 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,269,606 + PS417_14955 0.79 +0.7 3,269,698 + PS417_14955 0.81 +1.0 3,269,725 - PS417_14955 0.82 +0.3 3,269,842 - PS417_14955 0.84 +1.6 3,269,918 - PS417_14955 0.86 -2.4 3,269,933 + PS417_14955 0.87 -1.1 3,269,933 + PS417_14955 0.87 -2.5 3,269,933 + PS417_14955 0.87 +2.7 3,269,933 + PS417_14955 0.87 +0.5 3,269,934 - PS417_14955 0.87 +1.5 3,269,934 - PS417_14955 0.87 -0.2 3,269,934 - PS417_14955 0.87 -0.7 3,270,038 + PS417_14955 0.89 +0.3 3,270,039 - PS417_14955 0.89 +1.0 3,270,039 - PS417_14955 0.89 -0.7 3,270,089 - -1.6 3,270,105 + -3.5 3,270,105 + -1.3 3,270,321 + +0.9 3,270,322 - +0.4 3,270,336 + +1.2 3,270,421 + -0.9 3,270,423 + -0.8 3,270,423 + +1.1 3,270,423 + +0.2 3,270,423 + -1.8 3,270,423 + +0.4 3,270,423 + -0.4 3,270,423 + -1.5 3,270,423 + +1.0 3,270,424 - -1.9 3,270,424 - +1.3 3,270,424 - +1.9 3,270,424 - -0.0 3,270,424 - +1.6 3,270,424 - +0.2 3,270,447 - +0.1 3,270,448 + -0.7 3,270,489 - -1.8 3,270,965 + PS417_14960 0.38 -2.7 3,270,965 + PS417_14960 0.38 -0.4 3,270,969 + PS417_14960 0.39 -0.2 3,270,969 + PS417_14960 0.39 +2.0 3,271,013 + PS417_14960 0.42 -0.1 3,271,013 + PS417_14960 0.42 -1.1 3,271,013 + PS417_14960 0.42 +0.9 3,271,014 - PS417_14960 0.42 +0.8 3,271,014 - PS417_14960 0.42 +0.4 3,271,014 - PS417_14960 0.42 -0.1 3,271,014 - PS417_14960 0.42 -0.1 3,271,276 - PS417_14960 0.63 -0.6 3,271,349 + PS417_14960 0.68 -1.3 3,271,361 + PS417_14960 0.69 -0.4 3,271,361 + PS417_14960 0.69 -0.4 3,271,371 + PS417_14960 0.70 -0.7 3,271,613 + -0.5 3,271,613 + PS417_14960 0.89 -0.2 3,271,614 - PS417_14960 0.89 +0.1 3,271,683 - +0.8 3,271,730 + +1.4 3,271,730 + -2.3 3,271,743 - -1.6 3,271,757 + -0.6 3,271,866 - PS417_14965 0.16 +0.3 3,271,866 - PS417_14965 0.16 +0.3 3,271,866 - PS417_14965 0.16 -1.1 3,272,157 - PS417_14965 0.57 -0.8 3,272,300 - PS417_14965 0.77 -1.9 3,272,366 - PS417_14965 0.86 -1.6 3,272,505 + -1.7 3,272,505 + +0.7 3,272,506 - -0.6 3,272,506 - -0.7 3,272,583 + -0.3 3,272,620 - -0.9 3,272,620 - -0.3
Or see this region's nucleotide sequence