Experiment: Growth with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_2724 and PP_2725 are separated by 56 nucleotides PP_2725 and PP_2726 are separated by 89 nucleotides PP_2726 and PP_2727 are separated by 95 nucleotides PP_2727 and PP_2728 are separated by 78 nucleotides
PP_2724: PP_2724 - conserved protein of unknown function, at 3,110,375 to 3,110,899
_2724
PP_2725: PP_2725 - Protease PfpI, at 3,110,956 to 3,111,498
_2725
PP_2726: PP_2726 - conserved membrane protein of unknown function, at 3,111,588 to 3,112,280
_2726
PP_2727: PP_2727 - putative C-factor, at 3,112,376 to 3,113,146
_2727
PP_2728: PP_2728 - conserved protein of unknown function, at 3,113,225 to 3,113,716
_2728
Position (kb)
3111
3112
3113 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3110.690 kb on - strand, within PP_2724 at 3110.753 kb on + strand, within PP_2724 at 3110.753 kb on + strand, within PP_2724 at 3111.063 kb on + strand, within PP_2725 at 3111.102 kb on - strand, within PP_2725 at 3111.102 kb on - strand, within PP_2725 at 3111.355 kb on + strand, within PP_2725 at 3111.516 kb on - strand at 3111.526 kb on + strand at 3111.526 kb on + strand at 3111.574 kb on - strand at 3111.629 kb on + strand at 3111.629 kb on + strand at 3111.629 kb on + strand at 3111.630 kb on - strand at 3111.630 kb on - strand at 3111.790 kb on + strand, within PP_2726 at 3111.797 kb on - strand, within PP_2726 at 3111.871 kb on - strand, within PP_2726 at 3111.922 kb on - strand, within PP_2726 at 3111.928 kb on + strand, within PP_2726 at 3111.929 kb on - strand, within PP_2726 at 3112.065 kb on + strand, within PP_2726 at 3112.232 kb on + strand at 3112.248 kb on + strand at 3112.248 kb on + strand at 3112.249 kb on - strand at 3112.312 kb on + strand at 3112.641 kb on + strand, within PP_2727 at 3112.642 kb on - strand, within PP_2727 at 3113.236 kb on + strand at 3113.236 kb on + strand at 3113.236 kb on + strand at 3113.238 kb on + strand at 3113.238 kb on + strand at 3113.239 kb on - strand at 3113.239 kb on - strand at 3113.248 kb on - strand at 3113.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Growth with Chloride 200 mM remove 3,110,690 - PP_2724 0.60 +0.7 3,110,753 + PP_2724 0.72 +0.1 3,110,753 + PP_2724 0.72 +0.5 3,111,063 + PP_2725 0.20 -0.0 3,111,102 - PP_2725 0.27 -2.1 3,111,102 - PP_2725 0.27 -0.1 3,111,355 + PP_2725 0.73 -1.6 3,111,516 - -1.0 3,111,526 + -3.4 3,111,526 + -0.5 3,111,574 - -1.4 3,111,629 + +0.1 3,111,629 + +0.2 3,111,629 + -4.2 3,111,630 - +0.4 3,111,630 - -0.6 3,111,790 + PP_2726 0.29 +0.6 3,111,797 - PP_2726 0.30 -0.1 3,111,871 - PP_2726 0.41 +1.9 3,111,922 - PP_2726 0.48 +0.8 3,111,928 + PP_2726 0.49 -0.8 3,111,929 - PP_2726 0.49 +2.2 3,112,065 + PP_2726 0.69 +0.5 3,112,232 + +0.7 3,112,248 + -1.1 3,112,248 + +0.7 3,112,249 - +0.2 3,112,312 + -2.5 3,112,641 + PP_2727 0.34 +0.6 3,112,642 - PP_2727 0.35 -3.6 3,113,236 + -0.4 3,113,236 + +1.0 3,113,236 + -3.8 3,113,238 + +0.2 3,113,238 + -2.2 3,113,239 - +1.5 3,113,239 - +0.5 3,113,248 - -1.0 3,113,248 - -0.7
Or see this region's nucleotide sequence