Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04745 and PS417_04750 overlap by 11 nucleotides PS417_04750 and PS417_04755 are separated by 10 nucleotides PS417_04755 and PS417_04760 are separated by 7 nucleotides
PS417_04745: PS417_04745 - fusaric acid resistance protein, at 1,052,730 to 1,054,916
_04745
PS417_04750: PS417_04750 - hypothetical protein, at 1,054,906 to 1,055,106
_04750
PS417_04755: PS417_04755 - membrane protein, at 1,055,117 to 1,055,977
_04755
PS417_04760: PS417_04760 - hypothetical protein, at 1,055,985 to 1,056,386
_04760
Position (kb)
1054
1055
1056 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1053.961 kb on - strand, within PS417_04745 at 1054.290 kb on + strand, within PS417_04745 at 1054.290 kb on + strand at 1054.291 kb on - strand, within PS417_04745 at 1054.299 kb on - strand, within PS417_04745 at 1054.309 kb on - strand, within PS417_04745 at 1054.309 kb on - strand, within PS417_04745 at 1054.937 kb on - strand, within PS417_04750 at 1054.937 kb on - strand, within PS417_04750 at 1054.937 kb on - strand, within PS417_04750 at 1054.937 kb on - strand, within PS417_04750 at 1054.937 kb on - strand, within PS417_04750 at 1054.938 kb on + strand, within PS417_04750 at 1054.938 kb on + strand, within PS417_04750 at 1054.938 kb on + strand, within PS417_04750 at 1054.939 kb on - strand, within PS417_04750 at 1054.939 kb on - strand, within PS417_04750 at 1055.173 kb on + strand at 1055.198 kb on + strand at 1055.198 kb on + strand at 1055.198 kb on + strand at 1055.199 kb on - strand at 1055.517 kb on - strand, within PS417_04755 at 1055.594 kb on + strand, within PS417_04755 at 1055.594 kb on + strand, within PS417_04755 at 1055.595 kb on - strand, within PS417_04755 at 1055.595 kb on - strand, within PS417_04755 at 1055.595 kb on - strand, within PS417_04755 at 1055.628 kb on - strand, within PS417_04755 at 1055.801 kb on + strand, within PS417_04755 at 1055.802 kb on - strand, within PS417_04755 at 1055.802 kb on - strand, within PS417_04755 at 1055.802 kb on - strand, within PS417_04755 at 1055.996 kb on + strand at 1056.055 kb on - strand, within PS417_04760 at 1056.055 kb on - strand, within PS417_04760
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 1,053,961 - PS417_04745 0.56 -1.2 1,054,290 + PS417_04745 0.71 -1.2 1,054,290 + -0.6 1,054,291 - PS417_04745 0.71 +0.2 1,054,299 - PS417_04745 0.72 -0.7 1,054,309 - PS417_04745 0.72 -0.9 1,054,309 - PS417_04745 0.72 -0.9 1,054,937 - PS417_04750 0.15 +0.3 1,054,937 - PS417_04750 0.15 +2.8 1,054,937 - PS417_04750 0.15 -1.5 1,054,937 - PS417_04750 0.15 -0.1 1,054,937 - PS417_04750 0.15 -0.6 1,054,938 + PS417_04750 0.16 +0.5 1,054,938 + PS417_04750 0.16 -0.8 1,054,938 + PS417_04750 0.16 +0.7 1,054,939 - PS417_04750 0.16 -1.8 1,054,939 - PS417_04750 0.16 -0.7 1,055,173 + -0.1 1,055,198 + -0.6 1,055,198 + -1.1 1,055,198 + +1.6 1,055,199 - +0.2 1,055,517 - PS417_04755 0.46 -0.4 1,055,594 + PS417_04755 0.55 -0.1 1,055,594 + PS417_04755 0.55 +1.8 1,055,595 - PS417_04755 0.56 -0.1 1,055,595 - PS417_04755 0.56 +0.8 1,055,595 - PS417_04755 0.56 +1.3 1,055,628 - PS417_04755 0.59 -0.6 1,055,801 + PS417_04755 0.79 +0.3 1,055,802 - PS417_04755 0.80 -1.5 1,055,802 - PS417_04755 0.80 -0.6 1,055,802 - PS417_04755 0.80 +0.5 1,055,996 + -0.4 1,056,055 - PS417_04760 0.17 +0.8 1,056,055 - PS417_04760 0.17 -1.2
Or see this region's nucleotide sequence