Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03275 and PS417_03280 are separated by 61 nucleotides PS417_03280 and PS417_03285 overlap by 4 nucleotides PS417_03285 and PS417_03290 overlap by 11 nucleotides
PS417_03275: PS417_03275 - mammalian cell entry protein, at 749,018 to 751,321
_03275
PS417_03280: PS417_03280 - chromosome partitioning protein ParA, at 751,383 to 754,223
_03280
PS417_03285: PS417_03285 - chromosome partitioning protein, at 754,220 to 754,927
_03285
PS417_03290: PS417_03290 - hypothetical protein, at 754,917 to 756,194
_03290
Position (kb) 751
752
753
754
755 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 750.630 kb on + strand, within PS417_03275 at 750.656 kb on - strand, within PS417_03275 at 750.713 kb on - strand, within PS417_03275 at 750.796 kb on + strand, within PS417_03275 at 750.824 kb on + strand, within PS417_03275 at 750.825 kb on - strand, within PS417_03275 at 750.980 kb on + strand, within PS417_03275 at 751.070 kb on + strand, within PS417_03275 at 751.070 kb on + strand, within PS417_03275 at 751.071 kb on - strand, within PS417_03275 at 751.457 kb on - strand at 751.457 kb on - strand at 751.480 kb on + strand at 751.480 kb on + strand at 751.480 kb on + strand at 751.481 kb on - strand at 751.639 kb on + strand at 751.643 kb on - strand at 751.643 kb on - strand at 751.696 kb on + strand, within PS417_03280 at 751.696 kb on + strand, within PS417_03280 at 751.696 kb on + strand, within PS417_03280 at 751.697 kb on - strand, within PS417_03280 at 751.697 kb on - strand, within PS417_03280 at 751.697 kb on - strand, within PS417_03280 at 751.865 kb on - strand, within PS417_03280 at 751.976 kb on + strand, within PS417_03280 at 751.977 kb on - strand, within PS417_03280 at 752.106 kb on - strand, within PS417_03280 at 752.189 kb on - strand, within PS417_03280 at 752.189 kb on - strand, within PS417_03280 at 752.262 kb on + strand, within PS417_03280 at 752.272 kb on + strand at 752.272 kb on + strand, within PS417_03280 at 752.272 kb on + strand, within PS417_03280 at 752.273 kb on - strand, within PS417_03280 at 752.273 kb on - strand, within PS417_03280 at 752.327 kb on - strand at 752.665 kb on + strand, within PS417_03280 at 752.666 kb on - strand, within PS417_03280 at 752.841 kb on + strand, within PS417_03280 at 753.019 kb on + strand, within PS417_03280 at 753.019 kb on + strand, within PS417_03280 at 753.020 kb on - strand, within PS417_03280 at 753.020 kb on - strand, within PS417_03280 at 753.020 kb on - strand, within PS417_03280 at 753.184 kb on - strand, within PS417_03280 at 753.514 kb on + strand, within PS417_03280 at 753.514 kb on + strand, within PS417_03280 at 753.514 kb on + strand, within PS417_03280 at 753.534 kb on + strand, within PS417_03280 at 753.535 kb on - strand, within PS417_03280 at 753.535 kb on - strand, within PS417_03280 at 753.746 kb on + strand, within PS417_03280 at 753.794 kb on - strand, within PS417_03280 at 753.988 kb on + strand at 753.988 kb on + strand at 753.988 kb on + strand at 753.989 kb on - strand at 754.036 kb on + strand at 754.036 kb on + strand at 754.106 kb on + strand at 754.126 kb on + strand at 754.126 kb on + strand at 754.127 kb on - strand at 754.378 kb on + strand, within PS417_03285 at 754.570 kb on - strand, within PS417_03285 at 754.743 kb on + strand, within PS417_03285 at 754.746 kb on + strand, within PS417_03285 at 754.747 kb on - strand, within PS417_03285 at 754.834 kb on - strand, within PS417_03285 at 754.934 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 750,630 + PS417_03275 0.70 -1.4 750,656 - PS417_03275 0.71 -0.6 750,713 - PS417_03275 0.74 +0.2 750,796 + PS417_03275 0.77 +0.9 750,824 + PS417_03275 0.78 -1.4 750,825 - PS417_03275 0.78 -1.8 750,980 + PS417_03275 0.85 +0.8 751,070 + PS417_03275 0.89 +2.0 751,070 + PS417_03275 0.89 +0.6 751,071 - PS417_03275 0.89 -1.3 751,457 - +0.1 751,457 - -1.5 751,480 + -0.8 751,480 + +0.5 751,480 + -0.3 751,481 - -0.3 751,639 + +0.1 751,643 - +0.7 751,643 - -0.0 751,696 + PS417_03280 0.11 -0.1 751,696 + PS417_03280 0.11 -0.4 751,696 + PS417_03280 0.11 -1.9 751,697 - PS417_03280 0.11 -0.9 751,697 - PS417_03280 0.11 -1.0 751,697 - PS417_03280 0.11 -0.8 751,865 - PS417_03280 0.17 -1.8 751,976 + PS417_03280 0.21 -0.5 751,977 - PS417_03280 0.21 -1.0 752,106 - PS417_03280 0.25 +0.1 752,189 - PS417_03280 0.28 -0.6 752,189 - PS417_03280 0.28 -0.2 752,262 + PS417_03280 0.31 -0.3 752,272 + -0.4 752,272 + PS417_03280 0.31 -0.7 752,272 + PS417_03280 0.31 -0.1 752,273 - PS417_03280 0.31 -3.1 752,273 - PS417_03280 0.31 -0.1 752,327 - -0.3 752,665 + PS417_03280 0.45 -1.9 752,666 - PS417_03280 0.45 -0.7 752,841 + PS417_03280 0.51 -0.7 753,019 + PS417_03280 0.58 -0.3 753,019 + PS417_03280 0.58 +0.3 753,020 - PS417_03280 0.58 -1.4 753,020 - PS417_03280 0.58 +0.7 753,020 - PS417_03280 0.58 +0.9 753,184 - PS417_03280 0.63 -1.1 753,514 + PS417_03280 0.75 -2.3 753,514 + PS417_03280 0.75 +0.8 753,514 + PS417_03280 0.75 +0.1 753,534 + PS417_03280 0.76 +0.4 753,535 - PS417_03280 0.76 -0.9 753,535 - PS417_03280 0.76 -1.2 753,746 + PS417_03280 0.83 -0.7 753,794 - PS417_03280 0.85 -1.4 753,988 + +0.5 753,988 + +1.3 753,988 + +1.9 753,989 - +0.1 754,036 + -1.8 754,036 + -0.1 754,106 + -0.5 754,126 + -0.6 754,126 + -0.9 754,127 - +0.4 754,378 + PS417_03285 0.22 +0.4 754,570 - PS417_03285 0.49 -1.3 754,743 + PS417_03285 0.74 -0.8 754,746 + PS417_03285 0.74 +0.4 754,747 - PS417_03285 0.74 -0.2 754,834 - PS417_03285 0.87 -1.2 754,934 + +0.9
Or see this region's nucleotide sequence