Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0359 and PP_0360 are separated by 65 nucleotides PP_0360 and PP_0361 are separated by 49 nucleotides PP_0361 and PP_0362 are separated by 89 nucleotides
PP_0359: PP_0359 - serine/threonine protein kinase, at 437,352 to 438,359
_0359
PP_0360: PP_0360 - Molybdate transport regulator, at 438,425 to 439,189
_0360
PP_0361: PP_0361 - putative Competence protein ComF, at 439,239 to 439,970
_0361
PP_0362: PP_0362 - Biotin synthase, at 440,060 to 441,118
_0362
Position (kb)
439
440 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 438.343 kb on - strand at 438.362 kb on + strand at 438.370 kb on + strand at 438.370 kb on + strand at 438.427 kb on - strand at 438.427 kb on - strand at 438.450 kb on + strand at 438.450 kb on + strand at 438.451 kb on - strand at 438.451 kb on - strand at 438.622 kb on + strand, within PP_0360 at 438.623 kb on - strand, within PP_0360 at 438.623 kb on - strand, within PP_0360 at 438.623 kb on - strand, within PP_0360 at 438.623 kb on - strand, within PP_0360 at 438.656 kb on + strand, within PP_0360 at 438.657 kb on - strand, within PP_0360 at 438.677 kb on + strand, within PP_0360 at 438.678 kb on - strand, within PP_0360 at 438.790 kb on - strand, within PP_0360 at 438.905 kb on + strand, within PP_0360 at 438.936 kb on + strand, within PP_0360 at 438.936 kb on + strand, within PP_0360 at 438.937 kb on - strand, within PP_0360 at 439.069 kb on - strand, within PP_0360 at 439.069 kb on - strand, within PP_0360 at 439.076 kb on - strand, within PP_0360 at 439.120 kb on + strand at 439.120 kb on + strand at 439.121 kb on - strand at 439.121 kb on - strand at 439.121 kb on - strand at 439.193 kb on + strand at 439.193 kb on + strand at 439.193 kb on + strand at 439.201 kb on - strand at 439.201 kb on - strand at 439.202 kb on + strand at 439.202 kb on + strand at 439.202 kb on + strand at 439.202 kb on + strand at 439.202 kb on + strand at 439.202 kb on + strand at 439.203 kb on - strand at 439.203 kb on - strand at 439.216 kb on - strand at 439.216 kb on - strand at 439.216 kb on - strand at 439.242 kb on + strand at 439.242 kb on + strand at 439.242 kb on + strand at 439.242 kb on + strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.243 kb on - strand at 439.246 kb on + strand at 439.246 kb on + strand at 439.262 kb on + strand at 439.262 kb on + strand at 439.263 kb on - strand at 439.276 kb on + strand at 439.276 kb on + strand at 439.276 kb on + strand at 439.276 kb on + strand at 439.276 kb on + strand at 439.277 kb on - strand at 439.277 kb on - strand at 439.277 kb on - strand at 439.277 kb on - strand at 439.621 kb on + strand, within PP_0361 at 439.627 kb on + strand, within PP_0361 at 439.627 kb on + strand, within PP_0361 at 439.628 kb on - strand, within PP_0361 at 439.628 kb on - strand, within PP_0361 at 439.902 kb on + strand at 439.902 kb on + strand at 439.903 kb on - strand at 439.970 kb on + strand at 439.971 kb on - strand at 439.985 kb on + strand at 439.986 kb on - strand at 439.986 kb on - strand at 439.995 kb on - strand at 439.995 kb on - strand at 440.037 kb on - strand at 440.043 kb on + strand at 440.044 kb on - strand at 440.252 kb on + strand, within PP_0362 at 440.252 kb on + strand, within PP_0362 at 440.253 kb on - strand, within PP_0362 at 440.253 kb on - strand, within PP_0362 at 440.253 kb on - strand, within PP_0362 at 440.273 kb on + strand, within PP_0362 at 440.274 kb on - strand, within PP_0362 at 440.356 kb on + strand, within PP_0362 at 440.356 kb on + strand, within PP_0362 at 440.357 kb on - strand, within PP_0362 at 440.411 kb on + strand, within PP_0362 at 440.411 kb on + strand, within PP_0362 at 440.411 kb on + strand, within PP_0362 at 440.412 kb on - strand, within PP_0362 at 440.412 kb on - strand, within PP_0362 at 440.412 kb on - strand, within PP_0362 at 440.412 kb on - strand, within PP_0362 at 440.522 kb on + strand, within PP_0362 at 440.523 kb on - strand, within PP_0362 at 440.525 kb on + strand, within PP_0362 at 440.525 kb on + strand, within PP_0362 at 440.525 kb on + strand, within PP_0362 at 440.525 kb on + strand, within PP_0362 at 440.525 kb on + strand, within PP_0362 at 440.525 kb on + strand, within PP_0362 at 440.526 kb on - strand, within PP_0362 at 440.558 kb on + strand, within PP_0362 at 440.581 kb on + strand, within PP_0362 at 440.581 kb on + strand, within PP_0362 at 440.582 kb on - strand, within PP_0362 at 440.582 kb on - strand, within PP_0362 at 440.585 kb on + strand, within PP_0362 at 440.586 kb on - strand, within PP_0362 at 440.586 kb on - strand, within PP_0362 at 440.612 kb on + strand, within PP_0362 at 440.612 kb on + strand, within PP_0362 at 440.612 kb on + strand, within PP_0362 at 440.613 kb on - strand, within PP_0362 at 440.613 kb on - strand, within PP_0362 at 440.613 kb on - strand, within PP_0362 at 440.806 kb on + strand, within PP_0362 at 440.807 kb on - strand, within PP_0362 at 440.813 kb on - strand, within PP_0362 at 440.813 kb on - strand, within PP_0362 at 440.933 kb on + strand, within PP_0362
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 438,343 - -3.2 438,362 + -2.4 438,370 + +1.0 438,370 + -0.2 438,427 - +0.4 438,427 - -2.2 438,450 + +1.8 438,450 + -0.2 438,451 - -2.3 438,451 - +0.8 438,622 + PP_0360 0.26 +0.6 438,623 - PP_0360 0.26 +2.4 438,623 - PP_0360 0.26 +1.0 438,623 - PP_0360 0.26 -3.7 438,623 - PP_0360 0.26 +1.4 438,656 + PP_0360 0.30 -0.8 438,657 - PP_0360 0.30 -0.4 438,677 + PP_0360 0.33 +0.1 438,678 - PP_0360 0.33 -1.2 438,790 - PP_0360 0.48 +1.5 438,905 + PP_0360 0.63 -2.3 438,936 + PP_0360 0.67 -1.2 438,936 + PP_0360 0.67 -0.4 438,937 - PP_0360 0.67 +0.6 439,069 - PP_0360 0.84 -0.0 439,069 - PP_0360 0.84 +0.3 439,076 - PP_0360 0.85 +0.7 439,120 + +2.2 439,120 + -0.7 439,121 - +1.8 439,121 - -3.0 439,121 - +0.2 439,193 + -0.7 439,193 + -3.5 439,193 + -3.1 439,201 - +1.1 439,201 - +0.9 439,202 + -1.1 439,202 + -0.7 439,202 + -2.7 439,202 + -0.3 439,202 + +0.4 439,202 + -3.4 439,203 - +0.9 439,203 - -1.7 439,216 - +0.3 439,216 - -2.9 439,216 - -2.9 439,242 + -0.5 439,242 + +1.5 439,242 + -1.0 439,242 + -2.3 439,243 - -2.6 439,243 - -0.9 439,243 - -2.3 439,243 - -0.4 439,243 - +1.1 439,243 - +1.4 439,243 - +0.7 439,243 - +1.5 439,243 - -1.4 439,243 - +1.4 439,243 - -2.6 439,246 + -1.4 439,246 + +2.0 439,262 + +0.7 439,262 + +0.5 439,263 - -1.2 439,276 + -0.2 439,276 + -1.0 439,276 + -0.8 439,276 + +1.1 439,276 + +0.7 439,277 - -0.5 439,277 - +0.5 439,277 - -0.2 439,277 - -0.5 439,621 + PP_0361 0.52 -2.9 439,627 + PP_0361 0.53 -0.4 439,627 + PP_0361 0.53 -3.5 439,628 - PP_0361 0.53 -4.0 439,628 - PP_0361 0.53 +1.2 439,902 + -4.2 439,902 + -1.4 439,903 - -0.8 439,970 + +1.5 439,971 - -4.2 439,985 + -1.5 439,986 - +0.7 439,986 - -3.6 439,995 - -2.6 439,995 - -3.6 440,037 - -1.2 440,043 + -0.1 440,044 - -1.1 440,252 + PP_0362 0.18 -2.4 440,252 + PP_0362 0.18 +3.1 440,253 - PP_0362 0.18 -2.7 440,253 - PP_0362 0.18 -0.7 440,253 - PP_0362 0.18 -3.1 440,273 + PP_0362 0.20 -2.7 440,274 - PP_0362 0.20 -1.6 440,356 + PP_0362 0.28 -2.4 440,356 + PP_0362 0.28 -2.8 440,357 - PP_0362 0.28 -3.2 440,411 + PP_0362 0.33 -1.1 440,411 + PP_0362 0.33 +0.9 440,411 + PP_0362 0.33 -3.6 440,412 - PP_0362 0.33 -1.0 440,412 - PP_0362 0.33 -3.7 440,412 - PP_0362 0.33 -2.0 440,412 - PP_0362 0.33 -3.5 440,522 + PP_0362 0.44 -4.1 440,523 - PP_0362 0.44 -0.9 440,525 + PP_0362 0.44 -3.8 440,525 + PP_0362 0.44 -3.7 440,525 + PP_0362 0.44 -3.3 440,525 + PP_0362 0.44 -4.1 440,525 + PP_0362 0.44 -3.5 440,525 + PP_0362 0.44 -3.1 440,526 - PP_0362 0.44 -3.2 440,558 + PP_0362 0.47 -1.8 440,581 + PP_0362 0.49 -1.4 440,581 + PP_0362 0.49 -4.3 440,582 - PP_0362 0.49 -2.0 440,582 - PP_0362 0.49 -2.1 440,585 + PP_0362 0.50 -3.9 440,586 - PP_0362 0.50 -0.1 440,586 - PP_0362 0.50 +0.7 440,612 + PP_0362 0.52 -1.1 440,612 + PP_0362 0.52 -2.5 440,612 + PP_0362 0.52 -1.6 440,613 - PP_0362 0.52 -3.8 440,613 - PP_0362 0.52 -1.9 440,613 - PP_0362 0.52 -3.9 440,806 + PP_0362 0.70 +0.6 440,807 - PP_0362 0.71 -2.9 440,813 - PP_0362 0.71 -3.0 440,813 - PP_0362 0.71 -3.6 440,933 + PP_0362 0.82 -3.2
Or see this region's nucleotide sequence