Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02675 and PS417_02680 are separated by 786 nucleotides PS417_02680 and PS417_02685 are separated by 179 nucleotides
PS417_02675: PS417_02675 - ABC transporter ATP-binding protein, at 612,335 to 613,051
_02675
PS417_02680: PS417_02680 - hypothetical protein, at 613,838 to 614,605
_02680
PS417_02685: PS417_02685 - cation diffusion facilitator family transporter, at 614,785 to 615,690
_02685
Position (kb) 613
614
615 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 613.049 kb on + strand at 613.050 kb on - strand at 613.117 kb on - strand at 613.237 kb on + strand at 613.237 kb on + strand at 613.237 kb on + strand at 613.238 kb on - strand at 613.238 kb on - strand at 613.238 kb on - strand at 613.238 kb on - strand at 613.239 kb on + strand at 613.240 kb on - strand at 613.430 kb on + strand at 613.430 kb on + strand at 613.430 kb on + strand at 613.430 kb on + strand at 613.431 kb on - strand at 613.431 kb on - strand at 613.431 kb on - strand at 613.432 kb on + strand at 613.432 kb on + strand at 613.433 kb on - strand at 613.443 kb on + strand at 613.443 kb on + strand at 613.444 kb on - strand at 613.444 kb on - strand at 613.477 kb on - strand at 613.556 kb on + strand at 613.556 kb on + strand at 613.556 kb on + strand at 613.560 kb on + strand at 613.560 kb on + strand at 613.560 kb on + strand at 613.560 kb on + strand at 613.561 kb on - strand at 613.561 kb on - strand at 613.619 kb on - strand at 613.638 kb on + strand at 613.638 kb on + strand at 613.639 kb on - strand at 613.686 kb on + strand at 613.855 kb on + strand at 613.856 kb on - strand at 614.106 kb on + strand, within PS417_02680 at 614.267 kb on + strand, within PS417_02680 at 614.291 kb on + strand, within PS417_02680 at 614.291 kb on + strand, within PS417_02680 at 614.292 kb on - strand, within PS417_02680 at 614.439 kb on - strand, within PS417_02680 at 614.451 kb on - strand, within PS417_02680 at 614.603 kb on + strand at 614.603 kb on + strand at 614.603 kb on + strand at 614.604 kb on - strand at 614.604 kb on - strand at 614.604 kb on - strand at 614.718 kb on + strand at 614.718 kb on + strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.723 kb on + strand at 614.738 kb on - strand at 615.061 kb on + strand, within PS417_02685 at 615.061 kb on + strand, within PS417_02685 at 615.061 kb on + strand, within PS417_02685 at 615.062 kb on - strand, within PS417_02685 at 615.062 kb on - strand, within PS417_02685 at 615.134 kb on - strand, within PS417_02685 at 615.166 kb on + strand, within PS417_02685 at 615.166 kb on + strand, within PS417_02685 at 615.167 kb on - strand, within PS417_02685 at 615.175 kb on + strand, within PS417_02685 at 615.176 kb on - strand, within PS417_02685 at 615.328 kb on + strand, within PS417_02685 at 615.328 kb on + strand, within PS417_02685 at 615.329 kb on - strand, within PS417_02685 at 615.413 kb on + strand, within PS417_02685 at 615.413 kb on + strand, within PS417_02685 at 615.496 kb on + strand, within PS417_02685 at 615.496 kb on + strand, within PS417_02685 at 615.496 kb on + strand, within PS417_02685 at 615.496 kb on + strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.506 kb on - strand, within PS417_02685 at 615.542 kb on + strand, within PS417_02685 at 615.542 kb on + strand, within PS417_02685 at 615.542 kb on + strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 613,049 + +0.2 613,050 - +0.5 613,117 - -1.0 613,237 + -0.6 613,237 + -1.2 613,237 + +0.5 613,238 - +0.7 613,238 - -0.7 613,238 - -0.8 613,238 - -1.6 613,239 + -0.7 613,240 - -0.5 613,430 + -0.3 613,430 + -0.0 613,430 + +1.3 613,430 + +1.2 613,431 - -3.1 613,431 - -1.1 613,431 - -1.2 613,432 + -2.8 613,432 + +0.0 613,433 - -0.9 613,443 + +0.4 613,443 + -1.2 613,444 - +0.4 613,444 - +0.2 613,477 - -1.7 613,556 + +1.6 613,556 + +0.2 613,556 + +2.0 613,560 + -0.5 613,560 + -0.6 613,560 + +1.0 613,560 + +0.7 613,561 - +0.1 613,561 - -0.4 613,619 - +0.1 613,638 + -1.7 613,638 + -0.9 613,639 - -2.0 613,686 + -1.0 613,855 + +0.6 613,856 - +1.0 614,106 + PS417_02680 0.35 +1.2 614,267 + PS417_02680 0.56 +0.9 614,291 + PS417_02680 0.59 -0.6 614,291 + PS417_02680 0.59 +1.1 614,292 - PS417_02680 0.59 +1.8 614,439 - PS417_02680 0.78 -0.2 614,451 - PS417_02680 0.80 +2.4 614,603 + +0.3 614,603 + -0.1 614,603 + -0.7 614,604 - -1.8 614,604 - +0.2 614,604 - +2.1 614,718 + -1.0 614,718 + -0.0 614,719 - +2.5 614,719 - -3.8 614,719 - +1.3 614,719 - +0.6 614,719 - +1.2 614,719 - +0.6 614,719 - +0.8 614,723 + +0.8 614,738 - +1.0 615,061 + PS417_02685 0.30 -1.5 615,061 + PS417_02685 0.30 -0.7 615,061 + PS417_02685 0.30 -1.2 615,062 - PS417_02685 0.31 +0.3 615,062 - PS417_02685 0.31 -2.2 615,134 - PS417_02685 0.39 -2.4 615,166 + PS417_02685 0.42 -1.2 615,166 + PS417_02685 0.42 -2.2 615,167 - PS417_02685 0.42 +1.1 615,175 + PS417_02685 0.43 -0.3 615,176 - PS417_02685 0.43 +0.7 615,328 + PS417_02685 0.60 +1.8 615,328 + PS417_02685 0.60 -0.2 615,329 - PS417_02685 0.60 +0.3 615,413 + PS417_02685 0.69 -0.6 615,413 + PS417_02685 0.69 -1.2 615,496 + PS417_02685 0.78 -1.2 615,496 + PS417_02685 0.78 +0.1 615,496 + PS417_02685 0.78 -0.5 615,496 + PS417_02685 0.78 -1.3 615,497 - PS417_02685 0.79 +1.2 615,497 - PS417_02685 0.79 -0.3 615,497 - PS417_02685 0.79 +1.1 615,497 - PS417_02685 0.79 +0.4 615,497 - PS417_02685 0.79 -1.2 615,506 - PS417_02685 0.80 -0.9 615,542 + PS417_02685 0.84 +0.5 615,542 + PS417_02685 0.84 -3.2 615,542 + PS417_02685 0.84 +1.9 615,543 - PS417_02685 0.84 +2.1 615,543 - PS417_02685 0.84 +0.3 615,543 - PS417_02685 0.84 -3.2 615,543 - PS417_02685 0.84 -0.8 615,543 - PS417_02685 0.84 +0.7
Or see this region's nucleotide sequence