Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23425 and PS417_23430 are separated by 26 nucleotides PS417_23430 and PS417_23435 are separated by 498 nucleotides
PS417_23425: PS417_23425 - hypothetical protein, at 5,073,010 to 5,074,368
_23425
PS417_23430: PS417_23430 - hypothetical protein, at 5,074,395 to 5,076,170
_23430
PS417_23435: PS417_23435 - serine/threonine protein kinase, at 5,076,669 to 5,077,580
_23435
Position (kb)
5074
5075
5076
5077 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5073.402 kb on - strand, within PS417_23425 at 5073.429 kb on - strand, within PS417_23425 at 5073.429 kb on - strand, within PS417_23425 at 5073.446 kb on + strand, within PS417_23425 at 5073.446 kb on + strand, within PS417_23425 at 5073.446 kb on + strand, within PS417_23425 at 5073.446 kb on + strand, within PS417_23425 at 5073.447 kb on - strand, within PS417_23425 at 5073.447 kb on - strand, within PS417_23425 at 5073.447 kb on - strand, within PS417_23425 at 5073.447 kb on - strand, within PS417_23425 at 5073.479 kb on + strand, within PS417_23425 at 5073.480 kb on - strand, within PS417_23425 at 5073.602 kb on + strand, within PS417_23425 at 5073.603 kb on - strand, within PS417_23425 at 5073.791 kb on + strand, within PS417_23425 at 5073.909 kb on - strand, within PS417_23425 at 5073.909 kb on - strand, within PS417_23425 at 5073.909 kb on - strand, within PS417_23425 at 5073.911 kb on + strand, within PS417_23425 at 5073.911 kb on + strand, within PS417_23425 at 5073.992 kb on + strand, within PS417_23425 at 5074.032 kb on - strand, within PS417_23425 at 5074.044 kb on + strand, within PS417_23425 at 5074.045 kb on - strand, within PS417_23425 at 5074.045 kb on - strand, within PS417_23425 at 5074.046 kb on + strand, within PS417_23425 at 5074.046 kb on + strand, within PS417_23425 at 5074.046 kb on + strand, within PS417_23425 at 5074.046 kb on + strand, within PS417_23425 at 5074.047 kb on - strand, within PS417_23425 at 5074.047 kb on - strand, within PS417_23425 at 5074.047 kb on - strand, within PS417_23425 at 5074.047 kb on - strand, within PS417_23425 at 5074.047 kb on - strand, within PS417_23425 at 5074.047 kb on - strand, within PS417_23425 at 5074.047 kb on - strand, within PS417_23425 at 5074.103 kb on + strand, within PS417_23425 at 5074.103 kb on + strand, within PS417_23425 at 5074.104 kb on - strand, within PS417_23425 at 5074.104 kb on - strand, within PS417_23425 at 5074.104 kb on - strand, within PS417_23425 at 5074.362 kb on + strand at 5074.363 kb on - strand at 5074.386 kb on + strand at 5074.450 kb on + strand at 5074.450 kb on + strand at 5074.475 kb on - strand at 5074.475 kb on - strand at 5074.475 kb on - strand at 5074.492 kb on + strand at 5074.493 kb on - strand at 5074.493 kb on - strand at 5074.634 kb on - strand, within PS417_23430 at 5074.634 kb on - strand, within PS417_23430 at 5074.634 kb on - strand, within PS417_23430 at 5074.968 kb on - strand, within PS417_23430 at 5075.086 kb on + strand, within PS417_23430 at 5075.087 kb on - strand, within PS417_23430 at 5075.087 kb on - strand, within PS417_23430 at 5075.087 kb on - strand, within PS417_23430 at 5075.087 kb on - strand, within PS417_23430 at 5075.089 kb on + strand, within PS417_23430 at 5075.090 kb on - strand, within PS417_23430 at 5075.233 kb on + strand, within PS417_23430 at 5075.233 kb on + strand, within PS417_23430 at 5075.233 kb on + strand, within PS417_23430 at 5075.234 kb on - strand, within PS417_23430 at 5075.234 kb on - strand, within PS417_23430 at 5075.245 kb on + strand, within PS417_23430 at 5075.335 kb on - strand, within PS417_23430 at 5075.335 kb on - strand at 5075.335 kb on - strand, within PS417_23430 at 5075.425 kb on + strand, within PS417_23430 at 5075.426 kb on - strand, within PS417_23430 at 5075.426 kb on - strand, within PS417_23430 at 5075.426 kb on - strand, within PS417_23430 at 5075.663 kb on + strand, within PS417_23430 at 5075.664 kb on - strand, within PS417_23430 at 5075.664 kb on - strand, within PS417_23430 at 5075.664 kb on - strand, within PS417_23430 at 5075.728 kb on + strand, within PS417_23430 at 5075.728 kb on + strand, within PS417_23430 at 5075.729 kb on - strand, within PS417_23430 at 5075.845 kb on + strand, within PS417_23430 at 5075.845 kb on + strand, within PS417_23430 at 5075.851 kb on + strand, within PS417_23430 at 5075.868 kb on + strand, within PS417_23430 at 5075.868 kb on + strand, within PS417_23430 at 5075.868 kb on + strand, within PS417_23430 at 5075.869 kb on - strand, within PS417_23430 at 5075.869 kb on - strand, within PS417_23430 at 5075.869 kb on - strand, within PS417_23430 at 5076.222 kb on - strand at 5076.355 kb on + strand at 5076.356 kb on - strand at 5076.413 kb on + strand at 5076.497 kb on - strand at 5076.497 kb on - strand at 5076.500 kb on + strand at 5076.501 kb on - strand at 5076.524 kb on - strand at 5076.524 kb on - strand at 5076.524 kb on - strand at 5076.617 kb on - strand at 5076.679 kb on + strand at 5076.679 kb on + strand at 5076.910 kb on + strand, within PS417_23435 at 5076.910 kb on + strand, within PS417_23435 at 5076.910 kb on + strand, within PS417_23435 at 5076.910 kb on + strand, within PS417_23435 at 5077.114 kb on + strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.115 kb on - strand, within PS417_23435 at 5077.154 kb on - strand, within PS417_23435
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 5,073,402 - PS417_23425 0.29 -1.3 5,073,429 - PS417_23425 0.31 +0.1 5,073,429 - PS417_23425 0.31 +0.5 5,073,446 + PS417_23425 0.32 +0.1 5,073,446 + PS417_23425 0.32 +0.3 5,073,446 + PS417_23425 0.32 +0.6 5,073,446 + PS417_23425 0.32 +0.3 5,073,447 - PS417_23425 0.32 +0.7 5,073,447 - PS417_23425 0.32 -0.9 5,073,447 - PS417_23425 0.32 +1.1 5,073,447 - PS417_23425 0.32 +0.4 5,073,479 + PS417_23425 0.35 +0.2 5,073,480 - PS417_23425 0.35 +0.3 5,073,602 + PS417_23425 0.44 +1.5 5,073,603 - PS417_23425 0.44 -1.4 5,073,791 + PS417_23425 0.57 -0.8 5,073,909 - PS417_23425 0.66 -2.6 5,073,909 - PS417_23425 0.66 -0.2 5,073,909 - PS417_23425 0.66 -1.6 5,073,911 + PS417_23425 0.66 -0.0 5,073,911 + PS417_23425 0.66 -1.5 5,073,992 + PS417_23425 0.72 -0.5 5,074,032 - PS417_23425 0.75 +0.3 5,074,044 + PS417_23425 0.76 -0.1 5,074,045 - PS417_23425 0.76 -0.4 5,074,045 - PS417_23425 0.76 +2.1 5,074,046 + PS417_23425 0.76 -0.4 5,074,046 + PS417_23425 0.76 -0.3 5,074,046 + PS417_23425 0.76 -0.4 5,074,046 + PS417_23425 0.76 -2.9 5,074,047 - PS417_23425 0.76 -0.2 5,074,047 - PS417_23425 0.76 +0.2 5,074,047 - PS417_23425 0.76 +0.3 5,074,047 - PS417_23425 0.76 -2.3 5,074,047 - PS417_23425 0.76 -1.2 5,074,047 - PS417_23425 0.76 +1.2 5,074,047 - PS417_23425 0.76 -0.2 5,074,103 + PS417_23425 0.80 -1.5 5,074,103 + PS417_23425 0.80 +2.2 5,074,104 - PS417_23425 0.81 +0.4 5,074,104 - PS417_23425 0.81 -0.7 5,074,104 - PS417_23425 0.81 +0.4 5,074,362 + -1.6 5,074,363 - -1.1 5,074,386 + +0.2 5,074,450 + -0.7 5,074,450 + -3.5 5,074,475 - -0.1 5,074,475 - +0.2 5,074,475 - -0.2 5,074,492 + -0.2 5,074,493 - +0.6 5,074,493 - +0.5 5,074,634 - PS417_23430 0.13 -0.9 5,074,634 - PS417_23430 0.13 -0.8 5,074,634 - PS417_23430 0.13 +1.0 5,074,968 - PS417_23430 0.32 +0.6 5,075,086 + PS417_23430 0.39 +0.9 5,075,087 - PS417_23430 0.39 -0.4 5,075,087 - PS417_23430 0.39 +0.5 5,075,087 - PS417_23430 0.39 -2.1 5,075,087 - PS417_23430 0.39 +0.8 5,075,089 + PS417_23430 0.39 -0.2 5,075,090 - PS417_23430 0.39 +0.6 5,075,233 + PS417_23430 0.47 +3.1 5,075,233 + PS417_23430 0.47 +0.9 5,075,233 + PS417_23430 0.47 -1.2 5,075,234 - PS417_23430 0.47 -0.3 5,075,234 - PS417_23430 0.47 +0.4 5,075,245 + PS417_23430 0.48 -0.4 5,075,335 - PS417_23430 0.53 -0.3 5,075,335 - +0.6 5,075,335 - PS417_23430 0.53 -1.7 5,075,425 + PS417_23430 0.58 +0.0 5,075,426 - PS417_23430 0.58 +0.8 5,075,426 - PS417_23430 0.58 -0.4 5,075,426 - PS417_23430 0.58 -0.3 5,075,663 + PS417_23430 0.71 +1.2 5,075,664 - PS417_23430 0.71 -2.9 5,075,664 - PS417_23430 0.71 -0.7 5,075,664 - PS417_23430 0.71 +2.4 5,075,728 + PS417_23430 0.75 +0.6 5,075,728 + PS417_23430 0.75 -1.0 5,075,729 - PS417_23430 0.75 +1.9 5,075,845 + PS417_23430 0.82 +1.6 5,075,845 + PS417_23430 0.82 +2.5 5,075,851 + PS417_23430 0.82 +1.1 5,075,868 + PS417_23430 0.83 +0.7 5,075,868 + PS417_23430 0.83 -2.1 5,075,868 + PS417_23430 0.83 +0.3 5,075,869 - PS417_23430 0.83 -2.6 5,075,869 - PS417_23430 0.83 -0.1 5,075,869 - PS417_23430 0.83 +1.7 5,076,222 - +0.8 5,076,355 + -1.9 5,076,356 - +1.5 5,076,413 + -0.5 5,076,497 - +2.2 5,076,497 - +0.6 5,076,500 + +1.0 5,076,501 - +0.8 5,076,524 - +0.4 5,076,524 - -0.2 5,076,524 - -0.5 5,076,617 - -0.1 5,076,679 + -1.3 5,076,679 + -0.5 5,076,910 + PS417_23435 0.26 +0.5 5,076,910 + PS417_23435 0.26 +1.1 5,076,910 + PS417_23435 0.26 -0.5 5,076,910 + PS417_23435 0.26 -0.2 5,077,114 + PS417_23435 0.49 +1.9 5,077,115 - PS417_23435 0.49 +0.6 5,077,115 - PS417_23435 0.49 -0.5 5,077,115 - PS417_23435 0.49 +0.4 5,077,115 - PS417_23435 0.49 -2.3 5,077,115 - PS417_23435 0.49 -1.2 5,077,115 - PS417_23435 0.49 +0.8 5,077,154 - PS417_23435 0.53 +0.6
Or see this region's nucleotide sequence