Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21470 and PS417_21475 are separated by 21 nucleotides PS417_21475 and PS417_21480 overlap by 14 nucleotides PS417_21480 and PS417_21485 are separated by 768 nucleotides
PS417_21470: PS417_21470 - peptidase S49, at 4,659,750 to 4,660,733
_21470
PS417_21475: PS417_21475 - HAD family hydrolase, at 4,660,755 to 4,661,417
_21475
PS417_21480: PS417_21480 - 23S rRNA pseudouridylate synthase, at 4,661,404 to 4,662,363
_21480
PS417_21485: PS417_21485 - ribonuclease E, at 4,663,132 to 4,666,278
_21485
Position (kb)
4661
4662
4663 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4660.451 kb on + strand, within PS417_21470 at 4660.513 kb on + strand, within PS417_21470 at 4660.513 kb on + strand, within PS417_21470 at 4660.513 kb on + strand, within PS417_21470 at 4660.514 kb on - strand, within PS417_21470 at 4660.514 kb on - strand, within PS417_21470 at 4660.514 kb on - strand, within PS417_21470 at 4660.514 kb on - strand, within PS417_21470 at 4660.514 kb on - strand, within PS417_21470 at 4660.514 kb on - strand, within PS417_21470 at 4660.672 kb on - strand at 4660.686 kb on - strand at 4660.686 kb on - strand at 4660.686 kb on - strand at 4660.757 kb on - strand at 4660.757 kb on - strand at 4660.819 kb on + strand at 4660.852 kb on + strand, within PS417_21475 at 4660.852 kb on + strand, within PS417_21475 at 4660.852 kb on + strand, within PS417_21475 at 4661.179 kb on + strand, within PS417_21475 at 4661.179 kb on + strand, within PS417_21475 at 4661.179 kb on + strand, within PS417_21475 at 4661.401 kb on + strand at 4661.508 kb on - strand, within PS417_21480 at 4661.832 kb on - strand, within PS417_21480 at 4662.376 kb on - strand at 4662.726 kb on + strand at 4662.726 kb on + strand at 4662.772 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,660,451 + PS417_21470 0.71 +0.1 4,660,513 + PS417_21470 0.78 -0.2 4,660,513 + PS417_21470 0.78 -0.6 4,660,513 + PS417_21470 0.78 -0.1 4,660,514 - PS417_21470 0.78 +1.2 4,660,514 - PS417_21470 0.78 -2.8 4,660,514 - PS417_21470 0.78 +0.3 4,660,514 - PS417_21470 0.78 -0.9 4,660,514 - PS417_21470 0.78 -0.6 4,660,514 - PS417_21470 0.78 +0.6 4,660,672 - -2.6 4,660,686 - +0.9 4,660,686 - +0.7 4,660,686 - +0.0 4,660,757 - -0.4 4,660,757 - +0.4 4,660,819 + -0.5 4,660,852 + PS417_21475 0.15 +0.7 4,660,852 + PS417_21475 0.15 +1.5 4,660,852 + PS417_21475 0.15 +0.6 4,661,179 + PS417_21475 0.64 +0.1 4,661,179 + PS417_21475 0.64 +1.2 4,661,179 + PS417_21475 0.64 -0.5 4,661,401 + -0.6 4,661,508 - PS417_21480 0.11 -0.8 4,661,832 - PS417_21480 0.45 -1.9 4,662,376 - -2.9 4,662,726 + -2.7 4,662,726 + -0.6 4,662,772 + -0.7
Or see this region's nucleotide sequence