Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15660 and PS417_15665 are separated by 65 nucleotides PS417_15665 and PS417_15670 overlap by 12 nucleotides PS417_15670 and PS417_15675 are separated by 163 nucleotides PS417_15675 and PS417_15680 are separated by 70 nucleotides PS417_15680 and PS417_15685 are separated by 23 nucleotides PS417_15685 and PS417_15690 are separated by 63 nucleotides
PS417_15660: PS417_15660 - hemerythrin, at 3,433,353 to 3,433,829
_15660
PS417_15665: PS417_15665 - hypothetical protein, at 3,433,895 to 3,434,173
_15665
PS417_15670: PS417_15670 - hypothetical protein, at 3,434,162 to 3,434,371
_15670
PS417_15675: PS417_15675 - chemotaxis protein, at 3,434,535 to 3,436,154
_15675
PS417_15680: PS417_15680 - radical SAM protein, at 3,436,225 to 3,436,893
_15680
PS417_15685: PS417_15685 - oxidoreductase, at 3,436,917 to 3,437,072
_15685
PS417_15690: PS417_15690 - ribonucleoside-triphosphate reductase, at 3,437,136 to 3,439,124
_15690
Position (kb)
3434
3435
3436
3437 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 3433.560 kb on + strand, within PS417_15660 at 3433.560 kb on + strand, within PS417_15660 at 3433.560 kb on + strand, within PS417_15660 at 3433.560 kb on + strand, within PS417_15660 at 3433.561 kb on - strand, within PS417_15660 at 3433.561 kb on - strand, within PS417_15660 at 3433.561 kb on - strand at 3433.725 kb on - strand, within PS417_15660 at 3433.856 kb on - strand at 3434.077 kb on + strand, within PS417_15665 at 3434.132 kb on - strand, within PS417_15665 at 3434.152 kb on + strand at 3434.153 kb on - strand at 3434.226 kb on + strand, within PS417_15670 at 3434.227 kb on - strand, within PS417_15670 at 3434.406 kb on + strand at 3434.744 kb on + strand, within PS417_15675 at 3435.616 kb on + strand, within PS417_15675 at 3435.616 kb on + strand, within PS417_15675 at 3435.796 kb on + strand, within PS417_15675 at 3435.796 kb on + strand, within PS417_15675 at 3435.796 kb on + strand, within PS417_15675 at 3436.075 kb on + strand at 3436.075 kb on + strand at 3437.114 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,433,560 + PS417_15660 0.43 +0.8 3,433,560 + PS417_15660 0.43 +0.0 3,433,560 + PS417_15660 0.43 -0.8 3,433,560 + PS417_15660 0.43 -1.4 3,433,561 - PS417_15660 0.44 +0.5 3,433,561 - PS417_15660 0.44 +0.3 3,433,561 - +2.0 3,433,725 - PS417_15660 0.78 -0.2 3,433,856 - +0.2 3,434,077 + PS417_15665 0.65 +0.1 3,434,132 - PS417_15665 0.85 -0.4 3,434,152 + +0.7 3,434,153 - -0.3 3,434,226 + PS417_15670 0.30 +0.2 3,434,227 - PS417_15670 0.31 -1.8 3,434,406 + -1.4 3,434,744 + PS417_15675 0.13 -0.9 3,435,616 + PS417_15675 0.67 -0.7 3,435,616 + PS417_15675 0.67 -2.8 3,435,796 + PS417_15675 0.78 -2.0 3,435,796 + PS417_15675 0.78 -1.0 3,435,796 + PS417_15675 0.78 -1.1 3,436,075 + -1.7 3,436,075 + -1.4 3,437,114 - +6.7
Or see this region's nucleotide sequence