Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12695 and PS417_12700 are separated by 18 nucleotides PS417_12700 and PS417_12705 are separated by 22 nucleotides PS417_12705 and PS417_12710 are separated by 10 nucleotides
PS417_12695: PS417_12695 - mannitol dehydrogenase, at 2,762,097 to 2,763,578
_12695
PS417_12700: PS417_12700 - ABC transporter for D-Mannitol and D-Sorbitol, ATPase component (from data) , at 2,763,597 to 2,764,700
_12700
PS417_12705: PS417_12705 - ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) , at 2,764,723 to 2,765,553
_12705
PS417_12710: PS417_12710 - ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data) , at 2,765,564 to 2,766,457
_12710
Position (kb)
2763
2764
2765 Strain fitness (log2 ratio)
-8
-7
-6
-5
-4
-3
-2
-1
0
1
2 at 2763.026 kb on + strand, within PS417_12695 at 2763.172 kb on + strand, within PS417_12695 at 2763.323 kb on - strand, within PS417_12695 at 2763.448 kb on + strand at 2763.449 kb on - strand at 2763.449 kb on - strand at 2763.507 kb on - strand at 2763.520 kb on + strand at 2764.037 kb on - strand, within PS417_12700 at 2764.037 kb on - strand, within PS417_12700 at 2764.136 kb on - strand at 2764.441 kb on + strand, within PS417_12700 at 2764.450 kb on + strand, within PS417_12700 at 2764.450 kb on + strand, within PS417_12700 at 2764.451 kb on - strand, within PS417_12700 at 2764.721 kb on + strand at 2764.724 kb on + strand at 2764.951 kb on + strand, within PS417_12705 at 2764.952 kb on - strand, within PS417_12705 at 2765.115 kb on - strand, within PS417_12705 at 2765.271 kb on - strand, within PS417_12705 at 2765.342 kb on + strand, within PS417_12705 at 2765.342 kb on + strand, within PS417_12705 at 2765.351 kb on + strand, within PS417_12705 at 2765.352 kb on - strand, within PS417_12705 at 2765.379 kb on - strand, within PS417_12705 at 2765.379 kb on - strand, within PS417_12705 at 2765.694 kb on + strand, within PS417_12710
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 2,763,026 + PS417_12695 0.63 -0.9 2,763,172 + PS417_12695 0.73 -1.6 2,763,323 - PS417_12695 0.83 +1.4 2,763,448 + -0.8 2,763,449 - -0.9 2,763,449 - +0.4 2,763,507 - +0.3 2,763,520 + -0.3 2,764,037 - PS417_12700 0.40 +2.2 2,764,037 - PS417_12700 0.40 +1.3 2,764,136 - +0.6 2,764,441 + PS417_12700 0.76 +1.1 2,764,450 + PS417_12700 0.77 +0.2 2,764,450 + PS417_12700 0.77 -0.9 2,764,451 - PS417_12700 0.77 +2.5 2,764,721 + +0.3 2,764,724 + -0.2 2,764,951 + PS417_12705 0.27 +0.4 2,764,952 - PS417_12705 0.28 -1.6 2,765,115 - PS417_12705 0.47 +0.2 2,765,271 - PS417_12705 0.66 -0.4 2,765,342 + PS417_12705 0.74 -0.1 2,765,342 + PS417_12705 0.74 -0.6 2,765,351 + PS417_12705 0.76 -1.5 2,765,352 - PS417_12705 0.76 -7.9 2,765,379 - PS417_12705 0.79 -0.0 2,765,379 - PS417_12705 0.79 +0.2 2,765,694 + PS417_12710 0.15 +1.3
Or see this region's nucleotide sequence