Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_10025 and PS417_10030 overlap by 4 nucleotides PS417_10030 and PS417_10035 are separated by 174 nucleotides PS417_10035 and PS417_10040 are separated by 200 nucleotides PS417_10040 and PS417_10045 overlap by 4 nucleotides PS417_10045 and PS417_10050 are separated by 119 nucleotides
PS417_10025: PS417_10025 - bacteriophage lambda NinG family protein, at 2,155,358 to 2,155,993
_10025
PS417_10030: PS417_10030 - hypothetical protein, at 2,155,990 to 2,156,667
_10030
PS417_10035: PS417_10035 - hypothetical protein, at 2,156,842 to 2,157,603
_10035
PS417_10040: PS417_10040 - MFS transporter, at 2,157,804 to 2,158,142
_10040
PS417_10045: PS417_10045 - hypothetical protein, at 2,158,139 to 2,158,483
_10045
PS417_10050: PS417_10050 - hypothetical protein, at 2,158,603 to 2,158,794
_10050
Position (kb)
2156
2157
2158 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2155.950 kb on - strand at 2156.091 kb on - strand, within PS417_10030 at 2156.250 kb on + strand, within PS417_10030 at 2156.312 kb on - strand, within PS417_10030 at 2156.328 kb on + strand, within PS417_10030 at 2156.328 kb on + strand, within PS417_10030 at 2156.328 kb on + strand, within PS417_10030 at 2156.329 kb on - strand, within PS417_10030 at 2156.413 kb on - strand, within PS417_10030 at 2156.449 kb on + strand, within PS417_10030 at 2156.450 kb on - strand, within PS417_10030 at 2156.457 kb on - strand, within PS417_10030 at 2156.457 kb on - strand, within PS417_10030 at 2156.720 kb on - strand at 2156.893 kb on + strand at 2156.893 kb on + strand at 2156.912 kb on + strand at 2156.913 kb on - strand at 2156.916 kb on + strand at 2156.981 kb on - strand, within PS417_10035 at 2156.990 kb on + strand, within PS417_10035 at 2156.991 kb on - strand, within PS417_10035 at 2156.991 kb on - strand, within PS417_10035 at 2157.069 kb on + strand at 2157.076 kb on - strand, within PS417_10035 at 2157.096 kb on - strand, within PS417_10035 at 2157.096 kb on - strand, within PS417_10035 at 2157.161 kb on - strand at 2157.192 kb on + strand, within PS417_10035 at 2157.193 kb on - strand, within PS417_10035 at 2157.251 kb on - strand, within PS417_10035 at 2157.251 kb on - strand, within PS417_10035 at 2157.277 kb on + strand, within PS417_10035 at 2157.277 kb on + strand, within PS417_10035 at 2157.277 kb on + strand, within PS417_10035 at 2157.278 kb on - strand, within PS417_10035 at 2157.370 kb on + strand, within PS417_10035 at 2157.577 kb on + strand at 2157.603 kb on + strand at 2157.603 kb on + strand at 2157.603 kb on + strand at 2157.604 kb on - strand at 2157.604 kb on - strand at 2157.617 kb on + strand at 2157.617 kb on + strand at 2157.617 kb on + strand at 2157.618 kb on - strand at 2157.656 kb on - strand at 2157.773 kb on + strand at 2157.810 kb on + strand at 2157.810 kb on + strand at 2157.811 kb on - strand at 2157.814 kb on + strand at 2157.814 kb on + strand at 2157.963 kb on + strand, within PS417_10040 at 2158.203 kb on + strand, within PS417_10045 at 2158.247 kb on + strand, within PS417_10045 at 2158.280 kb on - strand, within PS417_10045 at 2158.555 kb on + strand at 2158.555 kb on + strand at 2158.555 kb on + strand at 2158.575 kb on + strand at 2158.603 kb on - strand at 2158.603 kb on - strand at 2158.603 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 2,155,950 - -0.0 2,156,091 - PS417_10030 0.15 -0.6 2,156,250 + PS417_10030 0.38 -0.7 2,156,312 - PS417_10030 0.47 +0.9 2,156,328 + PS417_10030 0.50 +1.1 2,156,328 + PS417_10030 0.50 -0.2 2,156,328 + PS417_10030 0.50 +1.2 2,156,329 - PS417_10030 0.50 +2.3 2,156,413 - PS417_10030 0.62 +2.4 2,156,449 + PS417_10030 0.68 +0.3 2,156,450 - PS417_10030 0.68 -0.0 2,156,457 - PS417_10030 0.69 -1.9 2,156,457 - PS417_10030 0.69 +0.6 2,156,720 - +0.2 2,156,893 + +0.8 2,156,893 + +0.7 2,156,912 + -1.0 2,156,913 - +0.1 2,156,916 + -1.9 2,156,981 - PS417_10035 0.18 -0.7 2,156,990 + PS417_10035 0.19 -1.7 2,156,991 - PS417_10035 0.20 +0.5 2,156,991 - PS417_10035 0.20 -1.0 2,157,069 + +3.3 2,157,076 - PS417_10035 0.31 +1.2 2,157,096 - PS417_10035 0.33 +0.4 2,157,096 - PS417_10035 0.33 +0.4 2,157,161 - +2.3 2,157,192 + PS417_10035 0.46 +0.2 2,157,193 - PS417_10035 0.46 -0.0 2,157,251 - PS417_10035 0.54 +0.1 2,157,251 - PS417_10035 0.54 -3.9 2,157,277 + PS417_10035 0.57 +2.3 2,157,277 + PS417_10035 0.57 +3.7 2,157,277 + PS417_10035 0.57 +0.8 2,157,278 - PS417_10035 0.57 +0.2 2,157,370 + PS417_10035 0.69 -1.0 2,157,577 + -0.3 2,157,603 + -0.3 2,157,603 + -1.3 2,157,603 + -0.6 2,157,604 - -1.5 2,157,604 - +0.1 2,157,617 + +3.4 2,157,617 + -0.1 2,157,617 + +0.4 2,157,618 - -2.3 2,157,656 - -1.5 2,157,773 + -0.2 2,157,810 + -0.1 2,157,810 + -0.5 2,157,811 - -0.8 2,157,814 + +0.0 2,157,814 + +0.3 2,157,963 + PS417_10040 0.47 -0.7 2,158,203 + PS417_10045 0.19 +1.0 2,158,247 + PS417_10045 0.31 -0.4 2,158,280 - PS417_10045 0.41 +0.0 2,158,555 + -1.9 2,158,555 + -0.2 2,158,555 + -0.7 2,158,575 + +0.1 2,158,603 - -1.1 2,158,603 - +0.9 2,158,603 - -1.1
Or see this region's nucleotide sequence