Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04900 and PS417_04905 are separated by 72 nucleotides PS417_04905 and PS417_04910 are separated by 10 nucleotides
PS417_04900: PS417_04900 - amino acid ABC transporter substrate-binding protein, at 1,091,773 to 1,092,804
_04900
PS417_04905: PS417_04905 - amino acid ABC transporter permease, at 1,092,877 to 1,094,058
_04905
PS417_04910: PS417_04910 - amino acid ABC transporter permease, at 1,094,069 to 1,095,166
_04910
Position (kb)
1092
1093
1094
1095 Strain fitness (log2 ratio)
-2
-1
0
1 at 1092.149 kb on - strand, within PS417_04900 at 1092.149 kb on - strand, within PS417_04900 at 1092.151 kb on + strand, within PS417_04900 at 1092.151 kb on + strand, within PS417_04900 at 1092.241 kb on - strand, within PS417_04900 at 1092.292 kb on + strand, within PS417_04900 at 1092.293 kb on - strand, within PS417_04900 at 1092.293 kb on - strand, within PS417_04900 at 1092.293 kb on - strand, within PS417_04900 at 1092.421 kb on + strand, within PS417_04900 at 1092.422 kb on - strand, within PS417_04900 at 1092.518 kb on - strand, within PS417_04900 at 1092.666 kb on - strand, within PS417_04900 at 1092.666 kb on - strand, within PS417_04900 at 1092.691 kb on + strand, within PS417_04900 at 1092.692 kb on - strand, within PS417_04900 at 1092.692 kb on - strand, within PS417_04900 at 1092.784 kb on + strand at 1092.785 kb on - strand at 1093.033 kb on - strand, within PS417_04905 at 1093.115 kb on - strand, within PS417_04905 at 1093.209 kb on - strand, within PS417_04905 at 1093.255 kb on + strand, within PS417_04905 at 1093.255 kb on + strand, within PS417_04905 at 1093.256 kb on - strand, within PS417_04905 at 1093.256 kb on - strand at 1093.687 kb on + strand, within PS417_04905 at 1094.027 kb on - strand at 1094.027 kb on - strand at 1094.080 kb on + strand at 1094.081 kb on - strand at 1094.201 kb on + strand, within PS417_04910 at 1094.330 kb on + strand, within PS417_04910 at 1094.330 kb on + strand, within PS417_04910 at 1094.331 kb on - strand, within PS417_04910 at 1094.331 kb on - strand, within PS417_04910 at 1094.411 kb on - strand, within PS417_04910 at 1094.798 kb on + strand, within PS417_04910 at 1094.798 kb on + strand, within PS417_04910 at 1094.799 kb on - strand, within PS417_04910
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 1,092,149 - PS417_04900 0.36 -0.5 1,092,149 - PS417_04900 0.36 -1.4 1,092,151 + PS417_04900 0.37 +0.2 1,092,151 + PS417_04900 0.37 -0.1 1,092,241 - PS417_04900 0.45 +0.7 1,092,292 + PS417_04900 0.50 +0.2 1,092,293 - PS417_04900 0.50 -0.5 1,092,293 - PS417_04900 0.50 +0.4 1,092,293 - PS417_04900 0.50 -1.0 1,092,421 + PS417_04900 0.63 -0.2 1,092,422 - PS417_04900 0.63 -1.2 1,092,518 - PS417_04900 0.72 -0.1 1,092,666 - PS417_04900 0.87 -0.4 1,092,666 - PS417_04900 0.87 +0.8 1,092,691 + PS417_04900 0.89 -0.7 1,092,692 - PS417_04900 0.89 -0.7 1,092,692 - PS417_04900 0.89 -0.5 1,092,784 + +0.6 1,092,785 - +0.7 1,093,033 - PS417_04905 0.13 -0.9 1,093,115 - PS417_04905 0.20 -0.7 1,093,209 - PS417_04905 0.28 -0.5 1,093,255 + PS417_04905 0.32 -1.1 1,093,255 + PS417_04905 0.32 -0.3 1,093,256 - PS417_04905 0.32 -1.1 1,093,256 - +0.7 1,093,687 + PS417_04905 0.69 -1.2 1,094,027 - -0.4 1,094,027 - -1.1 1,094,080 + +0.3 1,094,081 - -1.0 1,094,201 + PS417_04910 0.12 -0.6 1,094,330 + PS417_04910 0.24 -0.5 1,094,330 + PS417_04910 0.24 -0.4 1,094,331 - PS417_04910 0.24 -1.1 1,094,331 - PS417_04910 0.24 -1.6 1,094,411 - PS417_04910 0.31 -1.9 1,094,798 + PS417_04910 0.66 +0.2 1,094,798 + PS417_04910 0.66 -1.0 1,094,799 - PS417_04910 0.66 -0.7
Or see this region's nucleotide sequence