Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04590 and PS417_04595 are separated by 804 nucleotides PS417_04595 and PS417_04600 overlap by 4 nucleotides PS417_04600 and PS417_04605 overlap by 4 nucleotides
PS417_04590: PS417_04590 - methyltransferase, at 1,016,127 to 1,016,999
_04590
PS417_04595: PS417_04595 - cell division protein MraZ, at 1,017,804 to 1,018,259
_04595
PS417_04600: PS417_04600 - 16S rRNA methyltransferase, at 1,018,256 to 1,019,203
_04600
PS417_04605: PS417_04605 - cell division protein FtsL, at 1,019,200 to 1,019,493
_04605
Position (kb)
1017
1018
1019 Strain fitness (log2 ratio)
-2
-1
0
1 at 1016.876 kb on + strand, within PS417_04590 at 1016.877 kb on - strand, within PS417_04590 at 1016.887 kb on + strand, within PS417_04590 at 1016.887 kb on + strand, within PS417_04590 at 1016.888 kb on - strand, within PS417_04590 at 1016.964 kb on + strand at 1016.964 kb on + strand at 1016.997 kb on + strand at 1016.998 kb on - strand at 1017.018 kb on - strand at 1017.053 kb on - strand at 1017.055 kb on + strand at 1017.055 kb on + strand at 1017.056 kb on - strand at 1017.056 kb on - strand at 1017.487 kb on + strand at 1017.490 kb on + strand at 1017.491 kb on - strand at 1017.599 kb on + strand at 1017.724 kb on + strand at 1017.724 kb on + strand at 1017.937 kb on + strand, within PS417_04595
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 1,016,876 + PS417_04590 0.86 -0.4 1,016,877 - PS417_04590 0.86 -0.2 1,016,887 + PS417_04590 0.87 -0.1 1,016,887 + PS417_04590 0.87 -0.4 1,016,888 - PS417_04590 0.87 -1.0 1,016,964 + -0.2 1,016,964 + -1.3 1,016,997 + +0.3 1,016,998 - +0.7 1,017,018 - -2.2 1,017,053 - +0.7 1,017,055 + -0.6 1,017,055 + +0.3 1,017,056 - -1.5 1,017,056 - -0.5 1,017,487 + +0.2 1,017,490 + +1.0 1,017,491 - -0.2 1,017,599 + +0.3 1,017,724 + -1.6 1,017,724 + -1.4 1,017,937 + PS417_04595 0.29 -2.4
Or see this region's nucleotide sequence