Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00450 and PS417_00455 are separated by 376 nucleotides PS417_00455 and PS417_00460 are separated by 79 nucleotides PS417_00460 and PS417_00465 are separated by 2 nucleotides
PS417_00450: PS417_00450 - chemotaxis protein CheY, at 89,226 to 90,572
_00450
PS417_00455: PS417_00455 - hypothetical protein, at 90,949 to 91,233
_00455
PS417_00460: PS417_00460 - membrane protein, at 91,313 to 91,477
_00460
PS417_00465: PS417_00465 - hypothetical protein, at 91,480 to 91,947
_00465
Position (kb)
90
91
92 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 90.153 kb on + strand, within PS417_00450 at 90.154 kb on - strand, within PS417_00450 at 90.324 kb on + strand, within PS417_00450 at 90.475 kb on + strand at 90.475 kb on + strand at 90.475 kb on + strand at 90.476 kb on - strand at 90.535 kb on - strand at 90.589 kb on - strand at 90.594 kb on - strand at 90.594 kb on - strand at 90.610 kb on - strand at 90.643 kb on - strand at 90.675 kb on + strand at 90.675 kb on + strand at 90.676 kb on - strand at 90.676 kb on - strand at 90.676 kb on - strand at 90.692 kb on - strand at 90.729 kb on + strand at 90.730 kb on - strand at 90.908 kb on + strand at 90.908 kb on + strand at 90.909 kb on - strand at 90.925 kb on - strand at 90.981 kb on - strand, within PS417_00455 at 91.143 kb on - strand, within PS417_00455 at 91.143 kb on - strand, within PS417_00455 at 91.231 kb on + strand at 91.232 kb on - strand at 91.274 kb on - strand at 91.283 kb on - strand at 91.289 kb on + strand at 91.289 kb on + strand at 91.300 kb on - strand at 91.714 kb on + strand at 91.714 kb on + strand, within PS417_00465 at 91.714 kb on + strand at 91.715 kb on - strand, within PS417_00465 at 91.715 kb on - strand, within PS417_00465 at 91.801 kb on + strand, within PS417_00465 at 91.801 kb on + strand, within PS417_00465 at 91.802 kb on - strand, within PS417_00465 at 91.843 kb on - strand, within PS417_00465 at 91.935 kb on + strand at 91.936 kb on - strand at 91.936 kb on - strand at 91.942 kb on + strand at 91.942 kb on + strand at 91.945 kb on + strand at 91.945 kb on + strand at 91.945 kb on + strand at 91.945 kb on + strand at 91.945 kb on + strand at 91.946 kb on - strand at 91.946 kb on - strand at 91.946 kb on - strand at 91.946 kb on - strand at 91.946 kb on - strand at 92.090 kb on + strand at 92.090 kb on + strand at 92.185 kb on + strand at 92.207 kb on + strand at 92.207 kb on + strand at 92.207 kb on + strand at 92.207 kb on + strand at 92.208 kb on - strand at 92.208 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 90,153 + PS417_00450 0.69 +0.5 90,154 - PS417_00450 0.69 -0.4 90,324 + PS417_00450 0.82 +0.7 90,475 + -1.2 90,475 + +2.2 90,475 + -0.2 90,476 - -1.3 90,535 - +0.0 90,589 - -0.2 90,594 - -0.6 90,594 - +0.2 90,610 - -0.8 90,643 - +1.0 90,675 + +0.7 90,675 + -0.5 90,676 - +2.5 90,676 - +0.0 90,676 - +0.1 90,692 - +0.0 90,729 + +0.5 90,730 - -0.1 90,908 + +1.4 90,908 + -0.7 90,909 - +0.7 90,925 - +0.1 90,981 - PS417_00455 0.11 -1.5 91,143 - PS417_00455 0.68 -0.9 91,143 - PS417_00455 0.68 -0.7 91,231 + -0.1 91,232 - -0.4 91,274 - -1.2 91,283 - +0.4 91,289 + +0.5 91,289 + -0.1 91,300 - -0.4 91,714 + +1.7 91,714 + PS417_00465 0.50 -1.2 91,714 + +1.9 91,715 - PS417_00465 0.50 -0.9 91,715 - PS417_00465 0.50 -0.7 91,801 + PS417_00465 0.69 +0.6 91,801 + PS417_00465 0.69 -0.1 91,802 - PS417_00465 0.69 -0.3 91,843 - PS417_00465 0.78 -0.4 91,935 + -0.3 91,936 - +0.3 91,936 - -0.4 91,942 + -0.8 91,942 + +1.0 91,945 + -0.3 91,945 + -0.4 91,945 + -2.5 91,945 + +1.3 91,945 + -0.5 91,946 - +0.5 91,946 - -0.4 91,946 - +0.5 91,946 - +0.6 91,946 - -1.3 92,090 + -0.1 92,090 + +0.8 92,185 + +0.6 92,207 + -0.1 92,207 + +0.7 92,207 + -1.2 92,207 + -0.1 92,208 - -0.1 92,208 - -0.4
Or see this region's nucleotide sequence