Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19740 and PS417_19745 overlap by 1 nucleotides PS417_19745 and PS417_19750 are separated by 1 nucleotides PS417_19750 and PS417_19755 are separated by 46 nucleotides PS417_19755 and PS417_19760 are separated by 9 nucleotides PS417_19760 and PS417_19765 are separated by 235 nucleotides
PS417_19740: PS417_19740 - flagellar biosynthesis protein flip, at 4,288,524 to 4,289,267
_19740
PS417_19745: PS417_19745 - flagellar assembly protein FliO, at 4,289,267 to 4,289,710
_19745
PS417_19750: PS417_19750 - flagellar motor switch protein, at 4,289,712 to 4,290,179
_19750
PS417_19755: PS417_19755 - flagellar motor switch protein FliM, at 4,290,226 to 4,291,194
_19755
PS417_19760: PS417_19760 - flagellar basal body protein FliL, at 4,291,204 to 4,291,704
_19760
PS417_19765: PS417_19765 - flagellar hook-length control protein, at 4,291,940 to 4,293,271
_19765
Position (kb)
4290
4291
4292 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4289.268 kb on + strand at 4289.268 kb on + strand at 4289.383 kb on + strand, within PS417_19745 at 4289.612 kb on + strand, within PS417_19745 at 4289.613 kb on - strand, within PS417_19745 at 4289.613 kb on - strand, within PS417_19745 at 4289.704 kb on - strand at 4289.704 kb on - strand at 4290.016 kb on + strand, within PS417_19750 at 4290.180 kb on + strand at 4290.180 kb on + strand at 4290.180 kb on + strand at 4290.181 kb on - strand at 4290.181 kb on - strand at 4290.181 kb on - strand at 4290.181 kb on - strand at 4290.213 kb on + strand at 4290.213 kb on + strand at 4290.214 kb on - strand at 4291.060 kb on - strand, within PS417_19755 at 4291.214 kb on - strand at 4291.582 kb on - strand, within PS417_19760 at 4291.582 kb on - strand, within PS417_19760 at 4291.587 kb on - strand, within PS417_19760 at 4291.587 kb on - strand, within PS417_19760 at 4291.587 kb on - strand, within PS417_19760 at 4291.587 kb on - strand, within PS417_19760 at 4291.636 kb on + strand, within PS417_19760 at 4291.648 kb on - strand, within PS417_19760 at 4291.659 kb on + strand at 4291.660 kb on - strand at 4291.660 kb on - strand at 4291.660 kb on - strand at 4291.736 kb on - strand at 4291.857 kb on - strand at 4291.884 kb on + strand at 4291.885 kb on - strand at 4291.947 kb on + strand at 4291.948 kb on - strand at 4291.951 kb on - strand at 4291.951 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 4,289,268 + -1.9 4,289,268 + -2.6 4,289,383 + PS417_19745 0.26 -2.5 4,289,612 + PS417_19745 0.78 -2.2 4,289,613 - PS417_19745 0.78 -2.3 4,289,613 - PS417_19745 0.78 -1.7 4,289,704 - -0.2 4,289,704 - -1.7 4,290,016 + PS417_19750 0.65 -1.5 4,290,180 + -1.2 4,290,180 + -1.1 4,290,180 + -1.3 4,290,181 - -2.5 4,290,181 - -2.2 4,290,181 - -1.8 4,290,181 - -2.5 4,290,213 + -1.6 4,290,213 + -2.3 4,290,214 - +0.2 4,291,060 - PS417_19755 0.86 -1.6 4,291,214 - -0.0 4,291,582 - PS417_19760 0.75 +0.1 4,291,582 - PS417_19760 0.75 -0.2 4,291,587 - PS417_19760 0.76 -1.9 4,291,587 - PS417_19760 0.76 -0.3 4,291,587 - PS417_19760 0.76 -0.8 4,291,587 - PS417_19760 0.76 +1.2 4,291,636 + PS417_19760 0.86 -2.1 4,291,648 - PS417_19760 0.89 +0.9 4,291,659 + -2.9 4,291,660 - +1.1 4,291,660 - -0.0 4,291,660 - -0.1 4,291,736 - -2.9 4,291,857 - -1.4 4,291,884 + -0.0 4,291,885 - +0.1 4,291,947 + -3.5 4,291,948 - -3.7 4,291,951 - -2.6 4,291,951 - -0.5
Or see this region's nucleotide sequence