Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15100 and PS417_15105 overlap by 4 nucleotides PS417_15105 and PS417_15110 overlap by 4 nucleotides
PS417_15100: PS417_15100 - BatB protein, at 3,301,672 to 3,302,760
_15100
PS417_15105: PS417_15105 - membrane protein, at 3,302,757 to 3,304,496
_15105
PS417_15110: PS417_15110 - protein BatD, at 3,304,493 to 3,306,133
_15110
Position (kb)
3302
3303
3304
3305 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3301.780 kb on + strand at 3302.108 kb on - strand, within PS417_15100 at 3302.350 kb on + strand, within PS417_15100 at 3302.473 kb on + strand, within PS417_15100 at 3303.121 kb on + strand, within PS417_15105 at 3303.121 kb on + strand, within PS417_15105 at 3303.121 kb on + strand, within PS417_15105 at 3303.121 kb on + strand, within PS417_15105 at 3303.122 kb on - strand, within PS417_15105 at 3303.122 kb on - strand at 3303.122 kb on - strand, within PS417_15105 at 3303.122 kb on - strand, within PS417_15105 at 3303.123 kb on + strand, within PS417_15105 at 3303.123 kb on + strand, within PS417_15105 at 3303.344 kb on - strand, within PS417_15105 at 3303.712 kb on + strand, within PS417_15105 at 3303.790 kb on - strand, within PS417_15105 at 3303.841 kb on - strand, within PS417_15105 at 3303.930 kb on + strand, within PS417_15105 at 3303.931 kb on - strand, within PS417_15105 at 3303.931 kb on - strand, within PS417_15105 at 3303.972 kb on + strand, within PS417_15105 at 3303.982 kb on - strand, within PS417_15105 at 3304.815 kb on - strand, within PS417_15110 at 3304.922 kb on + strand, within PS417_15110 at 3304.922 kb on + strand, within PS417_15110 at 3304.923 kb on - strand, within PS417_15110 at 3305.105 kb on + strand, within PS417_15110
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 3,301,780 + -0.8 3,302,108 - PS417_15100 0.40 +1.9 3,302,350 + PS417_15100 0.62 -0.5 3,302,473 + PS417_15100 0.74 -0.4 3,303,121 + PS417_15105 0.21 -0.7 3,303,121 + PS417_15105 0.21 -2.7 3,303,121 + PS417_15105 0.21 -0.1 3,303,121 + PS417_15105 0.21 +0.3 3,303,122 - PS417_15105 0.21 -1.6 3,303,122 - -0.4 3,303,122 - PS417_15105 0.21 -1.2 3,303,122 - PS417_15105 0.21 -1.7 3,303,123 + PS417_15105 0.21 -0.1 3,303,123 + PS417_15105 0.21 -1.8 3,303,344 - PS417_15105 0.34 -2.1 3,303,712 + PS417_15105 0.55 +0.6 3,303,790 - PS417_15105 0.59 -0.8 3,303,841 - PS417_15105 0.62 -0.4 3,303,930 + PS417_15105 0.67 -1.6 3,303,931 - PS417_15105 0.67 +0.3 3,303,931 - PS417_15105 0.67 -2.0 3,303,972 + PS417_15105 0.70 -0.9 3,303,982 - PS417_15105 0.70 -0.4 3,304,815 - PS417_15110 0.20 +0.2 3,304,922 + PS417_15110 0.26 -0.7 3,304,922 + PS417_15110 0.26 -1.2 3,304,923 - PS417_15110 0.26 -1.2 3,305,105 + PS417_15110 0.37 -0.9
Or see this region's nucleotide sequence