Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22310 and PS417_22315 are separated by 114 nucleotides PS417_22315 and PS417_22320 overlap by 4 nucleotides
PS417_22310: PS417_22310 - CAIB/BAIF family CoA transferase, at 4,831,591 to 4,832,940
_22310
PS417_22315: PS417_22315 - DNA-3-methyladenine glycosylase, at 4,833,055 to 4,833,918
_22315
PS417_22320: PS417_22320 - amino acid APC transporter, at 4,833,915 to 4,835,342
_22320
Position (kb)
4833
4834 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4832.192 kb on + strand, within PS417_22310 at 4832.192 kb on + strand, within PS417_22310 at 4832.192 kb on + strand, within PS417_22310 at 4832.300 kb on + strand, within PS417_22310 at 4832.444 kb on - strand, within PS417_22310 at 4832.526 kb on + strand, within PS417_22310 at 4833.053 kb on + strand at 4833.099 kb on - strand at 4833.246 kb on - strand, within PS417_22315 at 4833.246 kb on - strand, within PS417_22315 at 4833.246 kb on - strand, within PS417_22315 at 4833.246 kb on - strand, within PS417_22315 at 4833.493 kb on + strand, within PS417_22315 at 4833.906 kb on - strand at 4833.937 kb on + strand at 4833.937 kb on + strand at 4833.937 kb on + strand at 4833.937 kb on + strand at 4833.937 kb on + strand at 4833.938 kb on - strand at 4833.938 kb on - strand at 4834.063 kb on + strand, within PS417_22320 at 4834.063 kb on + strand, within PS417_22320 at 4834.064 kb on - strand, within PS417_22320 at 4834.064 kb on - strand, within PS417_22320 at 4834.064 kb on - strand, within PS417_22320 at 4834.064 kb on - strand, within PS417_22320 at 4834.064 kb on - strand, within PS417_22320 at 4834.064 kb on - strand, within PS417_22320 at 4834.064 kb on - strand, within PS417_22320 at 4834.064 kb on - strand, within PS417_22320 at 4834.088 kb on - strand, within PS417_22320 at 4834.279 kb on + strand, within PS417_22320 at 4834.280 kb on - strand, within PS417_22320 at 4834.684 kb on + strand, within PS417_22320 at 4834.685 kb on - strand, within PS417_22320 at 4834.838 kb on + strand, within PS417_22320 at 4834.839 kb on - strand, within PS417_22320
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,832,192 + PS417_22310 0.45 +3.4 4,832,192 + PS417_22310 0.45 -1.3 4,832,192 + PS417_22310 0.45 -0.4 4,832,300 + PS417_22310 0.53 -0.4 4,832,444 - PS417_22310 0.63 +4.5 4,832,526 + PS417_22310 0.69 -0.9 4,833,053 + -1.6 4,833,099 - +1.9 4,833,246 - PS417_22315 0.22 -0.2 4,833,246 - PS417_22315 0.22 -1.6 4,833,246 - PS417_22315 0.22 -1.8 4,833,246 - PS417_22315 0.22 -0.0 4,833,493 + PS417_22315 0.51 -3.0 4,833,906 - +0.7 4,833,937 + -0.6 4,833,937 + +4.5 4,833,937 + +0.6 4,833,937 + -0.3 4,833,937 + +0.9 4,833,938 - +2.0 4,833,938 - -0.3 4,834,063 + PS417_22320 0.10 +0.4 4,834,063 + PS417_22320 0.10 +1.0 4,834,064 - PS417_22320 0.10 -0.3 4,834,064 - PS417_22320 0.10 +0.8 4,834,064 - PS417_22320 0.10 +3.2 4,834,064 - PS417_22320 0.10 +0.2 4,834,064 - PS417_22320 0.10 -0.8 4,834,064 - PS417_22320 0.10 -0.4 4,834,064 - PS417_22320 0.10 +1.4 4,834,064 - PS417_22320 0.10 -1.0 4,834,088 - PS417_22320 0.12 +1.0 4,834,279 + PS417_22320 0.25 -1.0 4,834,280 - PS417_22320 0.26 -0.9 4,834,684 + PS417_22320 0.54 -1.4 4,834,685 - PS417_22320 0.54 +0.5 4,834,838 + PS417_22320 0.65 -1.0 4,834,839 - PS417_22320 0.65 -0.8
Or see this region's nucleotide sequence