Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19765 and PS417_19770 are separated by 139 nucleotides PS417_19770 and PS417_19775 are separated by 30 nucleotides
PS417_19765: PS417_19765 - flagellar hook-length control protein, at 4,291,940 to 4,293,271
_19765
PS417_19770: PS417_19770 - histidine kinase, at 4,293,411 to 4,293,755
_19770
PS417_19775: PS417_19775 - chemotaxis protein CheY, at 4,293,786 to 4,295,504
_19775
Position (kb) 4293
4294 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 4292.590 kb on + strand, within PS417_19765 at 4293.271 kb on + strand at 4293.271 kb on + strand at 4293.272 kb on - strand at 4293.275 kb on + strand at 4293.275 kb on + strand at 4293.275 kb on + strand at 4293.275 kb on + strand at 4293.276 kb on - strand at 4293.276 kb on - strand at 4293.276 kb on - strand at 4293.321 kb on - strand at 4293.348 kb on - strand at 4293.362 kb on + strand at 4293.389 kb on - strand at 4293.744 kb on + strand at 4293.744 kb on + strand at 4293.825 kb on - strand at 4293.825 kb on - strand at 4293.847 kb on - strand at 4293.867 kb on + strand at 4294.014 kb on + strand, within PS417_19775 at 4294.014 kb on + strand, within PS417_19775 at 4294.014 kb on + strand, within PS417_19775 at 4294.015 kb on - strand, within PS417_19775 at 4294.015 kb on - strand, within PS417_19775 at 4294.015 kb on - strand, within PS417_19775 at 4294.015 kb on - strand, within PS417_19775 at 4294.015 kb on - strand, within PS417_19775 at 4294.015 kb on - strand, within PS417_19775 at 4294.016 kb on + strand, within PS417_19775 at 4294.016 kb on + strand, within PS417_19775 at 4294.016 kb on + strand, within PS417_19775 at 4294.016 kb on + strand, within PS417_19775 at 4294.016 kb on + strand, within PS417_19775 at 4294.016 kb on + strand, within PS417_19775 at 4294.017 kb on - strand, within PS417_19775 at 4294.017 kb on - strand, within PS417_19775 at 4294.017 kb on - strand, within PS417_19775 at 4294.017 kb on - strand, within PS417_19775 at 4294.019 kb on - strand, within PS417_19775 at 4294.019 kb on - strand, within PS417_19775 at 4294.064 kb on - strand, within PS417_19775 at 4294.231 kb on + strand, within PS417_19775 at 4294.232 kb on - strand, within PS417_19775 at 4294.306 kb on + strand, within PS417_19775 at 4294.307 kb on - strand, within PS417_19775 at 4294.307 kb on - strand, within PS417_19775 at 4294.566 kb on - strand, within PS417_19775
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,292,590 + PS417_19765 0.49 -5.1 4,293,271 + -4.3 4,293,271 + +1.7 4,293,272 - +1.1 4,293,275 + -3.2 4,293,275 + -2.3 4,293,275 + +0.3 4,293,275 + -0.9 4,293,276 - -0.6 4,293,276 - -2.3 4,293,276 - -4.3 4,293,321 - -2.6 4,293,348 - +0.7 4,293,362 + -0.5 4,293,389 - -3.3 4,293,744 + -2.4 4,293,744 + -1.8 4,293,825 - +0.5 4,293,825 - -1.0 4,293,847 - +2.3 4,293,867 + +0.3 4,294,014 + PS417_19775 0.13 -3.1 4,294,014 + PS417_19775 0.13 +0.3 4,294,014 + PS417_19775 0.13 +0.1 4,294,015 - PS417_19775 0.13 -0.8 4,294,015 - PS417_19775 0.13 -2.4 4,294,015 - PS417_19775 0.13 +0.3 4,294,015 - PS417_19775 0.13 -2.3 4,294,015 - PS417_19775 0.13 +0.2 4,294,015 - PS417_19775 0.13 +1.9 4,294,016 + PS417_19775 0.13 +2.2 4,294,016 + PS417_19775 0.13 +0.3 4,294,016 + PS417_19775 0.13 -0.3 4,294,016 + PS417_19775 0.13 -1.3 4,294,016 + PS417_19775 0.13 -2.1 4,294,016 + PS417_19775 0.13 +1.2 4,294,017 - PS417_19775 0.13 -0.6 4,294,017 - PS417_19775 0.13 +0.1 4,294,017 - PS417_19775 0.13 -0.7 4,294,017 - PS417_19775 0.13 -1.2 4,294,019 - PS417_19775 0.14 +1.7 4,294,019 - PS417_19775 0.14 -1.3 4,294,064 - PS417_19775 0.16 -3.2 4,294,231 + PS417_19775 0.26 -0.5 4,294,232 - PS417_19775 0.26 -0.1 4,294,306 + PS417_19775 0.30 +0.0 4,294,307 - PS417_19775 0.30 -1.1 4,294,307 - PS417_19775 0.30 -0.4 4,294,566 - PS417_19775 0.45 +0.5
Or see this region's nucleotide sequence