Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15690 and PS417_15695 are separated by 175 nucleotides PS417_15695 and PS417_15700 are separated by 1 nucleotides PS417_15700 and PS417_15705 are separated by 10 nucleotides
PS417_15690: PS417_15690 - ribonucleoside-triphosphate reductase, at 3,437,136 to 3,439,124
_15690
PS417_15695: PS417_15695 - molybdenum cofactor biosynthesis protein A, at 3,439,300 to 3,440,286
_15695
PS417_15700: PS417_15700 - peptidylprolyl isomerase, at 3,440,288 to 3,441,103
_15700
PS417_15705: PS417_15705 - nitrate reductase, at 3,441,114 to 3,441,794
_15705
Position (kb)
3439
3440
3441 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 3438.340 kb on + strand, within PS417_15690 at 3438.340 kb on + strand, within PS417_15690 at 3438.341 kb on - strand, within PS417_15690 at 3438.618 kb on - strand, within PS417_15690 at 3438.661 kb on + strand, within PS417_15690 at 3438.661 kb on + strand, within PS417_15690 at 3438.662 kb on - strand, within PS417_15690 at 3438.662 kb on - strand at 3438.731 kb on - strand, within PS417_15690 at 3438.779 kb on - strand, within PS417_15690 at 3438.779 kb on - strand, within PS417_15690 at 3438.805 kb on - strand, within PS417_15690 at 3438.859 kb on + strand, within PS417_15690 at 3438.880 kb on + strand, within PS417_15690 at 3438.881 kb on - strand, within PS417_15690 at 3438.951 kb on + strand at 3438.964 kb on - strand at 3439.141 kb on + strand at 3439.141 kb on + strand at 3439.141 kb on + strand at 3439.141 kb on + strand at 3439.142 kb on - strand at 3439.146 kb on - strand at 3439.146 kb on - strand at 3439.148 kb on - strand at 3439.164 kb on + strand at 3439.165 kb on - strand at 3439.252 kb on - strand at 3439.283 kb on + strand at 3439.320 kb on + strand at 3439.515 kb on + strand, within PS417_15695 at 3439.593 kb on - strand, within PS417_15695 at 3439.702 kb on + strand, within PS417_15695 at 3439.703 kb on - strand, within PS417_15695 at 3439.703 kb on - strand, within PS417_15695 at 3439.703 kb on - strand, within PS417_15695 at 3439.855 kb on + strand, within PS417_15695 at 3440.204 kb on + strand at 3440.250 kb on - strand at 3440.619 kb on + strand, within PS417_15700 at 3441.000 kb on + strand, within PS417_15700 at 3441.155 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,438,340 + PS417_15690 0.61 -1.9 3,438,340 + PS417_15690 0.61 +1.3 3,438,341 - PS417_15690 0.61 +1.3 3,438,618 - PS417_15690 0.75 +2.4 3,438,661 + PS417_15690 0.77 +0.4 3,438,661 + PS417_15690 0.77 -0.6 3,438,662 - PS417_15690 0.77 -1.0 3,438,662 - +4.8 3,438,731 - PS417_15690 0.80 +0.7 3,438,779 - PS417_15690 0.83 -0.3 3,438,779 - PS417_15690 0.83 -0.4 3,438,805 - PS417_15690 0.84 +2.0 3,438,859 + PS417_15690 0.87 -0.2 3,438,880 + PS417_15690 0.88 -1.7 3,438,881 - PS417_15690 0.88 -1.2 3,438,951 + -2.4 3,438,964 - +0.7 3,439,141 + -1.2 3,439,141 + -0.9 3,439,141 + -1.5 3,439,141 + -0.2 3,439,142 - +3.6 3,439,146 - +4.4 3,439,146 - +7.3 3,439,148 - +6.2 3,439,164 + +0.8 3,439,165 - +7.7 3,439,252 - +5.2 3,439,283 + +0.2 3,439,320 + -1.6 3,439,515 + PS417_15695 0.22 +0.4 3,439,593 - PS417_15695 0.30 +4.5 3,439,702 + PS417_15695 0.41 +0.4 3,439,703 - PS417_15695 0.41 +4.6 3,439,703 - PS417_15695 0.41 +5.1 3,439,703 - PS417_15695 0.41 +4.7 3,439,855 + PS417_15695 0.56 -1.4 3,440,204 + +0.3 3,440,250 - +2.5 3,440,619 + PS417_15700 0.41 +1.5 3,441,000 + PS417_15700 0.87 +0.4 3,441,155 - +3.8
Or see this region's nucleotide sequence